STRINGSTRING
LOC107103972 LOC107103972 ppp4r3a ppp4r3a ppp2r5a ppp2r5a b3gat3 b3gat3 LOC107098271 LOC107098271 bmpr1a bmpr1a LOC107084853 LOC107084853 bmpr2 bmpr2 ptpa ptpa LOC107088541 LOC107088541 cnep1r1 cnep1r1 LOC107092426 LOC107092426 bmpr1b bmpr1b LOC107089892 LOC107089892 gtf2f1 gtf2f1 ppp2r5b ppp2r5b LOC107083031 LOC107083031 LOC107088457 LOC107088457
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107103972Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (739 aa)
ppp4r3aSMEK homolog 1, suppressor of mek1 (Dictyostelium). (818 aa)
ppp2r5aSerine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit. (511 aa)
b3gat3Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family. (336 aa)
LOC107098271Phosphatase and actin regulator 4a. (1187 aa)
bmpr1aSerine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (522 aa)
LOC107084853Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit. (415 aa)
bmpr2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1052 aa)
ptpaSerine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (319 aa)
LOC107088541Phosphatase and actin regulator. (879 aa)
cnep1r1CTD nuclear envelope phosphatase 1 regulatory subunit 1. (125 aa)
LOC107092426Phosphatase and actin regulator. (598 aa)
bmpr1bSerine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (543 aa)
LOC107089892Protein phosphatase 4, regulatory subunit 3B. (656 aa)
gtf2f1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (504 aa)
ppp2r5bSerine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit. (461 aa)
LOC107083031Phosphatase and actin regulator. (591 aa)
LOC107088457Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (538 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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