(91 nodes) Syntaxin binding network (Cyprinodon variegatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	syt3	Synaptotagmin III. (549 aa)
	syt1	Synaptotagmin Ia. (422 aa)
	LOC107102274	Syntaxin binding protein 1b; Belongs to the STXBP/unc-18/SEC1 family. (603 aa)
	stx6	Syntaxin 6; Belongs to the syntaxin family. (252 aa)
	golga2	Golgin A2. (1100 aa)
	LOC107095951	Syntaphilin a. (462 aa)
	ENSCVAP00000030142	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (159 aa)
	syt12	Synaptotagmin XII. (423 aa)
	LOC107084039	Synaptotagmin IXa. (563 aa)
	ENSCVAP00000031477	WD_REPEATS_REGION domain-containing protein. (324 aa)
	LOC107083922	Synaptotagmin IIa. (431 aa)
	LOC107086509	Vesicle-associated membrane protein 8 (endobrevin). (124 aa)
	LOC107098387	Uncharacterized protein. (1525 aa)
	LOC107097226	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (88 aa)
	stx16	Syntaxin 16. (279 aa)
	LOC107093818	Transmembrane p24 trafficking protein 4. (220 aa)
	nsf	N-ethylmaleimide-sensitive factor a. (748 aa)
	ENSCVAP00000009295	C2 domain-containing protein. (158 aa)
	SCFD2	Sec1 family domain containing 2. (577 aa)
	haus2	Uncharacterized protein. (266 aa)
	LOC107091600	Syntaxin binding protein 5b (tomosyn). (1185 aa)
	LOC107091582	Taxilin beta b. (522 aa)
	stxbp1	Syntaxin binding protein 1a; Belongs to the STXBP/unc-18/SEC1 family. (603 aa)
	ENSCVAP00000003610	Uncharacterized protein. (73 aa)
	LOC107086112	V-SNARE coiled-coil homology domain-containing protein. (119 aa)
	ENSCVAP00000002273	Uncharacterized protein. (352 aa)
	LOC107097573	N-ethylmaleimide-sensitive factor attachment protein, beta b. (296 aa)
	napg	N-ethylmaleimide-sensitive factor attachment protein, gamma b. (306 aa)
	LOC107095723	Uncharacterized protein. (1189 aa)
	vps11	Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family. (917 aa)
	ENSCVAP00000000394	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (231 aa)
	LOC107093429	Syntaxin binding protein 2; Belongs to the STXBP/unc-18/SEC1 family. (585 aa)
	LOC107094896	Synaptotagmin IXb. (525 aa)
	LOC107099465	Uncharacterized protein. (295 aa)
	LOC107089162	Uncharacterized protein. (431 aa)
	UNC13C	Unc-13 homolog C. (2108 aa)
	LOC107088641	Two pore segment channel 3. (598 aa)
	vps54	VPS54 subunit of GARP complex. (877 aa)
	syt10	Synaptotagmin X. (551 aa)
	cplx4	Complexin 4a. (159 aa)
	hectd3	HECT domain containing 3. (856 aa)
	LOC107093652	Taxilin alpha. (540 aa)
	snap47	Synaptosome associated protein 47. (425 aa)
	CPLX1	Complexin 2. (133 aa)
	snap29	Synaptosome associated protein 29. (260 aa)
	LOC107096951	Unc-13 homolog A. (1603 aa)
	LOC107083393	Complexin 2, like. (134 aa)
	ENSCVAP00000017153	PDZ domain-containing protein. (224 aa)
	txlnb	Uncharacterized protein. (622 aa)
	UNC13B	Unc-13 homolog B. (1438 aa)
	LOC107098651	Synaptotagmin VIa. (451 aa)
	LOC107081114	VPS52 subunit of GARP complex. (615 aa)
	tmed10	Transmembrane p24 trafficking protein 10. (209 aa)
	Vamp1	Zgc:92912. (125 aa)
	napa	N-ethylmaleimide-sensitive factor attachment protein, alpha b. (295 aa)
	ENSCVAP00000021350	C2 domain-containing protein. (382 aa)
	vamp4	Vesicle-associated membrane protein 4. (169 aa)
	snap25	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (204 aa)
	ENSCVAP00000022246	Synaptotagmin VIIa. (462 aa)
	Vamp3	V-SNARE coiled-coil homology domain-containing protein. (109 aa)
	ENSCVAP00000022810	C2 domain-containing protein. (163 aa)
	scfd1	Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family. (592 aa)
	sybu	Syntabulin (syntaxin-interacting). (662 aa)
	syt7	Synaptotagmin VIIb. (563 aa)
	ENSCVAP00000024301	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (156 aa)
	ENSCVAP00000024317	Myb_DNA-bind_5 domain-containing protein. (373 aa)
	LOC107104472	Vacuolar protein sorting-associated protein 52 homolog. (615 aa)
	LOC107082578	Vesicle-associated membrane protein 2. (150 aa)
	LOC107089917	Complexin 3b. (156 aa)
	LOC107102522	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (201 aa)
	LOC107099642	Taxilin gamma. (447 aa)
	ENSCVAP00000006974	Uncharacterized protein. (195 aa)
	stxbp5	Syntaxin binding protein 5a (tomosyn). (1147 aa)
	tmed9	Transmembrane p24 trafficking protein 9. (236 aa)
	cplx2	Complexin 2. (133 aa)
	fam172a	Family with sequence similarity 172 member A. (420 aa)
	LOC107097210	Synaptotagmin Vb. (424 aa)
	LOC107093238	N-ethylmaleimide-sensitive factor b. (746 aa)
	LOC107083203	Uncharacterized protein. (433 aa)
	stx10	Syntaxin 10. (241 aa)
	tpcn1	Two pore segment channel 1. (832 aa)
	stxbp3	Syntaxin binding protein 3; Belongs to the STXBP/unc-18/SEC1 family. (592 aa)
	ENSCVAP00000027216	Syntaxin binding protein 5-like. (561 aa)
	LOC107095419	Gamma-soluble NSF attachment protein-like. (306 aa)
	ENSCVAP00000027726	Uncharacterized protein. (188 aa)
	ENSCVAP00000027742	Syntaphilin b. (701 aa)
	LOC107093748	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (233 aa)
	LOC107101223	Synaptotagmin-1-like. (424 aa)
	ENSCVAP00000028286	ANK_REP_REGION domain-containing protein. (1004 aa)
	ENSCVAP00000028481	Protein kinase domain-containing protein. (510 aa)
	ENSCVAP00000028571	Proline-rich transmembrane protein 2. (166 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPLX1	ENSCVAP00000000394	ENSCVAP00000015574	ENSCVAP00000000394	Complexin 2.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.409
CPLX1	ENSCVAP00000024301	ENSCVAP00000015574	ENSCVAP00000024301	Complexin 2.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.409
CPLX1	LOC107102522	ENSCVAP00000015574	ENSCVAP00000007611	Complexin 2.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.409
CPLX1	snap25	ENSCVAP00000015574	ENSCVAP00000021761	Complexin 2.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.409
ENSCVAP00000000394	CPLX1	ENSCVAP00000000394	ENSCVAP00000015574	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	Complexin 2.	0.409
ENSCVAP00000000394	ENSCVAP00000003610	ENSCVAP00000000394	ENSCVAP00000003610	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	Uncharacterized protein.	0.408
ENSCVAP00000000394	ENSCVAP00000006974	ENSCVAP00000000394	ENSCVAP00000006974	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	Uncharacterized protein.	0.476
ENSCVAP00000000394	ENSCVAP00000009295	ENSCVAP00000000394	ENSCVAP00000009295	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	C2 domain-containing protein.	0.737
ENSCVAP00000000394	ENSCVAP00000021350	ENSCVAP00000000394	ENSCVAP00000021350	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	C2 domain-containing protein.	0.501
ENSCVAP00000000394	ENSCVAP00000022246	ENSCVAP00000000394	ENSCVAP00000022246	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	Synaptotagmin VIIa.	0.408
ENSCVAP00000000394	ENSCVAP00000022810	ENSCVAP00000000394	ENSCVAP00000022810	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	C2 domain-containing protein.	0.737
ENSCVAP00000000394	ENSCVAP00000027216	ENSCVAP00000000394	ENSCVAP00000027216	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	Syntaxin binding protein 5-like.	0.521
ENSCVAP00000000394	ENSCVAP00000030142	ENSCVAP00000000394	ENSCVAP00000030142	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.693
ENSCVAP00000000394	ENSCVAP00000031477	ENSCVAP00000000394	ENSCVAP00000031477	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	WD_REPEATS_REGION domain-containing protein.	0.521
ENSCVAP00000000394	LOC107082578	ENSCVAP00000000394	ENSCVAP00000024795	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	Vesicle-associated membrane protein 2.	0.806
ENSCVAP00000000394	LOC107083393	ENSCVAP00000000394	ENSCVAP00000016998	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	Complexin 2, like.	0.585
ENSCVAP00000000394	LOC107083922	ENSCVAP00000000394	ENSCVAP00000032835	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	Synaptotagmin IIa.	0.817
ENSCVAP00000000394	LOC107086112	ENSCVAP00000000394	ENSCVAP00000002358	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	V-SNARE coiled-coil homology domain-containing protein.	0.806
ENSCVAP00000000394	LOC107086509	ENSCVAP00000000394	ENSCVAP00000004323	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	Vesicle-associated membrane protein 8 (endobrevin).	0.745
ENSCVAP00000000394	LOC107089162	ENSCVAP00000000394	ENSCVAP00000012682	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	Uncharacterized protein.	0.817