STRINGSTRING
LOC107103464 LOC107103464 arnt2 arnt2 ENSCVAP00000002049 ENSCVAP00000002049 AR AR LOC107099750 LOC107099750 ar ar LOC107091048 LOC107091048 LOC107082678 LOC107082678 tgfb2 tgfb2 med1 med1 cav1 cav1 LOC107088815 LOC107088815 LOC107101915 LOC107101915 LOC107093866 LOC107093866 LOC107103699 LOC107103699 LOC107090375 LOC107090375 LOC107084241 LOC107084241 LOC107090395 LOC107090395 nkx2-3 nkx2-3 LOC107102255 LOC107102255 LOC107080667 LOC107080667 ENSCVAP00000017074 ENSCVAP00000017074 ENSCVAP00000017554 ENSCVAP00000017554 lrp6 lrp6 LOC107090721 LOC107090721 nav3 nav3 LOC107083120 LOC107083120 LOC107083382 LOC107083382 eda eda LOC107093336 LOC107093336 sema3c sema3c CUL3 CUL3 LOC107092858 LOC107092858 LOC107081961 LOC107081961 LOC107100354 LOC107100354 fem1b fem1b sostdc1 sostdc1 LOC107096737 LOC107096737 wnt2 wnt2 ENSCVAP00000025406 ENSCVAP00000025406 fgf7 fgf7 lamb3 lamb3 BAX BAX LOC107085859 LOC107085859 ENSCVAP00000028872 ENSCVAP00000028872 elf3 elf3 hnf1b hnf1b LOC107094161 LOC107094161 tgfb3 tgfb3 LOC107086215 LOC107086215
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107103464Tenascin C. (1526 aa)
arnt2Aryl-hydrocarbon receptor nuclear translocator 2. (722 aa)
ENSCVAP00000002049EGF-like domain-containing protein. (103 aa)
ARAndrogen receptor. (384 aa)
LOC107099750CULLIN_2 domain-containing protein; Belongs to the cullin family. (767 aa)
arNuclear receptor domain-containing protein. (542 aa)
LOC107091048Marker of proliferation Ki-67. (1794 aa)
LOC107082678Fibrinogen C-terminal domain-containing protein. (325 aa)
tgfb2Transforming growth factor beta; Belongs to the TGF-beta family. (415 aa)
med1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1786 aa)
cav1Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (180 aa)
LOC107088815Aryl hydrocarbon receptor nuclear translocator. (787 aa)
LOC107101915Transforming growth factor, alpha. (242 aa)
LOC107093866NK3 homeobox 1. (192 aa)
LOC107103699Transforming growth factor beta; Belongs to the TGF-beta family. (349 aa)
LOC107090375Uncharacterized protein. (271 aa)
LOC107084241Insulin-like growth factor binding protein 5a. (250 aa)
LOC107090395Peptidase S72 domain-containing protein. (908 aa)
nkx2-3NK2 homeobox 3. (347 aa)
LOC107102255Dystroglycan 1. (905 aa)
LOC107080667Uncharacterized protein. (202 aa)
ENSCVAP00000017074TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (64 aa)
ENSCVAP00000017554Uncharacterized protein. (680 aa)
lrp6Low-density lipoprotein receptor-related protein; Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Belongs to the LDLR family. (1609 aa)
LOC107090721CCAAT enhancer binding protein beta. (287 aa)
nav3Neuron navigator 3. (2349 aa)
LOC107083120Transforming growth factor beta; Belongs to the TGF-beta family. (407 aa)
LOC107083382BCL2 apoptosis regulator b. (227 aa)
edaEctodysplasin A; Belongs to the tumor necrosis factor family. (368 aa)
LOC107093336Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (161 aa)
sema3cSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C; Belongs to the semaphorin family. (758 aa)
CUL3Cullin 3; Belongs to the cullin family. (766 aa)
LOC107092858Zmp:0000000846. (2391 aa)
LOC107081961Homeobox domain-containing protein. (360 aa)
LOC107100354Cytochrome P450, family 7, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family. (498 aa)
fem1bFem-1 homolog b (C. elegans). (627 aa)
sostdc1Sclerostin domain containing 1a. (219 aa)
LOC107096737Low density lipoprotein receptor-related protein 5. (1633 aa)
wnt2Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (350 aa)
ENSCVAP00000025406Uncharacterized protein. (327 aa)
fgf7Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (200 aa)
lamb3Uncharacterized protein. (922 aa)
BAXBCL2 associated X, apoptosis regulator. (191 aa)
LOC107085859Uncharacterized protein. (232 aa)
ENSCVAP00000028872EGF-like domain-containing protein. (83 aa)
elf3E74-like factor 3 (ets domain transcription factor, epithelial-specific ). (342 aa)
hnf1bHNF1 homeobox Ba. (567 aa)
LOC107094161Fibrinogen C-terminal domain-containing protein. (315 aa)
tgfb3Transforming growth factor beta; Belongs to the TGF-beta family. (400 aa)
LOC107086215Insulin-like growth factor binding protein 5a. (267 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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