76 items (Cyprinodon variegatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	clta	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (232 aa)
	LOC107083922	Synaptotagmin IIa. (431 aa)
	ap2m1	AP-2 complex subunit mu; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but i [...] (442 aa)
	LOC107084039	Synaptotagmin IXa. (563 aa)
	syt12	Synaptotagmin XII. (423 aa)
	cltcl1	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1690 aa)
	LOC107082456	Epsin 3b. (601 aa)
	syt1	Synaptotagmin Ia. (422 aa)
	syt3	Synaptotagmin III. (549 aa)
	ENSCVAP00000028481	Protein kinase domain-containing protein. (510 aa)
	ENSCVAP00000028286	ANK_REP_REGION domain-containing protein. (1004 aa)
	LOC107090293	AP complex subunit beta. (919 aa)
	LOC107101223	Synaptotagmin-1-like. (424 aa)
	epn2	Epsin 2. (579 aa)
	ap1b1	AP complex subunit beta. (985 aa)
	gak	Cyclin G associated kinase. (1313 aa)
	LOC107083203	Uncharacterized protein. (433 aa)
	LOC107101887	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1677 aa)
	hip1	Huntingtin interacting protein 1. (990 aa)
	picalm	Phosphatidylinositol binding clathrin assembly protein b. (736 aa)
	syt7	Synaptotagmin VIIb. (563 aa)
	LOC107101473	Alpha_adaptinC2 domain-containing protein. (841 aa)
	LOC107086061	Uncharacterized protein. (1213 aa)
	ENSCVAP00000022810	C2 domain-containing protein. (163 aa)
	ap1g1	AP-1 complex subunit gamma. (820 aa)
	ENSCVAP00000022246	Synaptotagmin VIIa. (462 aa)
	LOC107103921	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...] (948 aa)
	dnajc6	DnaJ (Hsp40) homolog, subfamily C, member 6. (902 aa)
	Snap91	Uncharacterized protein. (638 aa)
	LOC107087290	Huntingtin interacting protein 1 related b. (1067 aa)
	aftph	Aftiphilin a. (734 aa)
	LOC107098651	Synaptotagmin VIa. (451 aa)
	sclt1	Sodium channel and clathrin linker 1. (631 aa)
	ENSCVAP00000018854	ENTH domain-containing protein. (92 aa)
	LOC107086242	Target of myb1 like 2 membrane trafficking protein; Belongs to the TOM1 family. (434 aa)
	LOC107083423	Calcyon neuron-specific vesicular protein. (198 aa)
	tepsin	TEPSIN adaptor related protein complex 4 accessory protein. (644 aa)
	ap2s1	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (142 aa)
	ldlrap1	Low density lipoprotein receptor adaptor protein 1b. (323 aa)
	LOC107093644	Low density lipoprotein receptor adaptor protein 1a. (307 aa)
	ENSCVAP00000014770	Uncharacterized protein. (109 aa)
	syt4	Synaptotagmin IV. (472 aa)
	ENSCVAP00000014430	Uncharacterized protein. (114 aa)
	LOC107104663	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1679 aa)
	syt10	Synaptotagmin X. (551 aa)
	ENSCVAP00000013392	ENTH domain-containing protein. (129 aa)
	LOC107089162	Uncharacterized protein. (431 aa)
	ENSCVAP00000012583	Uncharacterized protein. (58 aa)
	LOC107084214	ENTH domain-containing protein. (562 aa)
	LOC107101248	Synaptotagmin Va. (413 aa)
	ENSCVAP00000011875	VHS domain-containing protein. (195 aa)
	cltb	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (197 aa)
	LOC107090916	Synaptotagmin XV. (331 aa)
	LOC107084222	ENTH domain-containing protein. (671 aa)
	LOC107094896	Synaptotagmin IXb. (525 aa)
	ap4b1	Adaptor related protein complex 4 subunit beta 1. (766 aa)
	armc9	Armadillo repeat containing 9. (843 aa)
	LOC107086539	Clathrin interactor 1a. (615 aa)
	ENSCVAP00000009295	C2 domain-containing protein. (158 aa)
	LOC107104383	Si:ch211-200p22.4. (546 aa)
	syt11	Synaptotagmin XIb. (461 aa)
	LOC107100152	Epsin 3a. (601 aa)
	LOC107089300	Stonin-1; May be involved in the endocytic machinery. (706 aa)
	LOC107094487	Synaptosome associated protein 91b. (578 aa)
	LOC107087706	AP-1 complex subunit gamma. (798 aa)
	LOC107090075	G protein-coupled receptor 108. (642 aa)
	LOC107097210	Synaptotagmin Vb. (424 aa)
	nsg2	Neuronal vesicle trafficking associated 2. (180 aa)
	ENSCVAP00000003610	Uncharacterized protein. (73 aa)
	LOC107095751	Uncharacterized protein. (102 aa)
	TOM1L2	Target of myb1 like 2 membrane trafficking protein; Belongs to the TOM1 family. (538 aa)
	NSG1	Neuronal vesicle trafficking associated 1. (185 aa)
	Tom1	Target of myb1 membrane trafficking protein. (219 aa)
	LOC107082218	Epsin 1. (644 aa)
	dab2	DAB adaptor protein 2. (767 aa)
	ENSCVAP00000000105	ENTH domain-containing protein. (232 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCVAP00000000105	ENSCVAP00000012583	ENSCVAP00000000105	ENSCVAP00000012583	ENTH domain-containing protein.	Uncharacterized protein.	0.467
ENSCVAP00000000105	ENSCVAP00000014430	ENSCVAP00000000105	ENSCVAP00000014430	ENTH domain-containing protein.	Uncharacterized protein.	0.590
ENSCVAP00000000105	ENSCVAP00000014770	ENSCVAP00000000105	ENSCVAP00000014770	ENTH domain-containing protein.	Uncharacterized protein.	0.564
ENSCVAP00000000105	ENSCVAP00000018854	ENSCVAP00000000105	ENSCVAP00000018854	ENTH domain-containing protein.	ENTH domain-containing protein.	0.474
ENSCVAP00000000105	LOC107082218	ENSCVAP00000000105	ENSCVAP00000000330	ENTH domain-containing protein.	Epsin 1.	0.506
ENSCVAP00000000105	LOC107082456	ENSCVAP00000000105	ENSCVAP00000029431	ENTH domain-containing protein.	Epsin 3b.	0.506
ENSCVAP00000000105	LOC107084222	ENSCVAP00000000105	ENSCVAP00000011420	ENTH domain-containing protein.	ENTH domain-containing protein.	0.418
ENSCVAP00000000105	LOC107086061	ENSCVAP00000000105	ENSCVAP00000023476	ENTH domain-containing protein.	Uncharacterized protein.	0.536
ENSCVAP00000000105	LOC107086539	ENSCVAP00000000105	ENSCVAP00000009681	ENTH domain-containing protein.	Clathrin interactor 1a.	0.418
ENSCVAP00000000105	LOC107087290	ENSCVAP00000000105	ENSCVAP00000019672	ENTH domain-containing protein.	Huntingtin interacting protein 1 related b.	0.564
ENSCVAP00000000105	LOC107087706	ENSCVAP00000000105	ENSCVAP00000004960	ENTH domain-containing protein.	AP-1 complex subunit gamma.	0.521
ENSCVAP00000000105	LOC107090293	ENSCVAP00000000105	ENSCVAP00000028162	ENTH domain-containing protein.	AP complex subunit beta.	0.467
ENSCVAP00000000105	LOC107100152	ENSCVAP00000000105	ENSCVAP00000007205	ENTH domain-containing protein.	Epsin 3a.	0.506
ENSCVAP00000000105	LOC107101473	ENSCVAP00000000105	ENSCVAP00000023523	ENTH domain-containing protein.	Alpha_adaptinC2 domain-containing protein.	0.583
ENSCVAP00000000105	LOC107101887	ENSCVAP00000000105	ENSCVAP00000025415	ENTH domain-containing protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.590
ENSCVAP00000000105	LOC107103921	ENSCVAP00000000105	ENSCVAP00000021034	ENTH domain-containing protein.	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	0.726
ENSCVAP00000000105	LOC107104663	ENSCVAP00000000105	ENSCVAP00000014297	ENTH domain-containing protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.590
ENSCVAP00000000105	Snap91	ENSCVAP00000000105	ENSCVAP00000019939	ENTH domain-containing protein.	Uncharacterized protein.	0.817
ENSCVAP00000000105	ap1b1	ENSCVAP00000000105	ENSCVAP00000027396	ENTH domain-containing protein.	AP complex subunit beta.	0.467
ENSCVAP00000000105	ap1g1	ENSCVAP00000000105	ENSCVAP00000022539	ENTH domain-containing protein.	AP-1 complex subunit gamma.	0.521