STRINGSTRING
fxr1 fxr1 zfyve27 zfyve27 ENSCVAP00000014019 ENSCVAP00000014019 LOC107102270 LOC107102270 ENSCVAP00000013947 ENSCVAP00000013947 exoc7 exoc7 LOC107099431 LOC107099431 zpr1 zpr1 tshz3 tshz3 ENSCVAP00000013511 ENSCVAP00000013511 LOC107090931 LOC107090931 LAMP5 LAMP5 LOC107101783 LOC107101783 ENSCVAP00000010141 ENSCVAP00000010141 LOC107101295 LOC107101295 fmr1 fmr1 ENSCVAP00000009299 ENSCVAP00000009299 LOC107089214 LOC107089214 LOC107104735 LOC107104735 kif21b kif21b pink1 pink1 Cdk5r2 Cdk5r2 shtn1 shtn1 LOC107089302 LOC107089302 LOC107084435 LOC107084435 auts2 auts2 ABITRAM ABITRAM cdk5r1 cdk5r1 myo9a myo9a neo1 neo1 LOC107089413 LOC107089413 LOC107104893 LOC107104893 ENSCVAP00000002916 ENSCVAP00000002916 ENSCVAP00000002342 ENSCVAP00000002342 LOC107095774 LOC107095774 LOC107095772 LOC107095772 LOC107095817 LOC107095817 LOC107093204 LOC107093204 elavl4 elavl4 LOC107086801 LOC107086801 unc5c unc5c ENSCVAP00000032923 ENSCVAP00000032923 LOC107090732 LOC107090732 exoc8 exoc8 LOC107081512 LOC107081512 shank2 shank2 LOC107085087 LOC107085087 LOC107093615 LOC107093615 ENSCVAP00000029632 ENSCVAP00000029632 LOC107102465 LOC107102465 Zpr1 Zpr1 gap43 gap43 ENSCVAP00000028481 ENSCVAP00000028481 ENSCVAP00000028286 ENSCVAP00000028286 lrrtm1 lrrtm1 ELAVL2 ELAVL2 syap1 syap1 LOC107101840 LOC107101840 LOC107104728 LOC107104728 whrn whrn LOC107104706 LOC107104706 LOC107104490 LOC107104490 EXOC4 EXOC4 ENSCVAP00000023371 ENSCVAP00000023371 nin nin copa copa rufy3 rufy3 LOC107092801 LOC107092801 dtnbp1 dtnbp1 l1cam l1cam rtn4r rtn4r LOC107100548 LOC107100548 LOC107103977 LOC107103977 LOC107101662 LOC107101662 flrt3 flrt3 LOC107102147 LOC107102147 LOC107086848 LOC107086848 LOC107105186 LOC107105186 cdk5 cdk5 LOC107094234 LOC107094234 c9orf72 c9orf72
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fxr1Fragile X mental retardation, autosomal homolog 1. (705 aa)
zfyve27Zinc finger, FYVE domain containing 27. (420 aa)
ENSCVAP00000014019SH3 domain-containing protein. (102 aa)
LOC107102270Whirlin b. (819 aa)
ENSCVAP00000013947Microtubule-associated protein. (294 aa)
exoc7Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (684 aa)
LOC107099431Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (478 aa)
zpr1ZPR1 zinc finger. (170 aa)
tshz3Teashirt zinc finger homeobox 3a. (1112 aa)
ENSCVAP00000013511Si:dkey-33o22.1. (93 aa)
LOC107090931Microtubule-associated protein. (741 aa)
LAMP5Lysosomal associated membrane protein family member 5. (277 aa)
LOC107101783Uncharacterized protein. (278 aa)
ENSCVAP00000010141Fasciculation and elongation protein zeta 1 (zygin I). (195 aa)
LOC107101295Actin binding transcription modulator. (181 aa)
fmr1Fragile X mental retardation 1. (549 aa)
ENSCVAP00000009299FERM_f0 domain-containing protein. (131 aa)
LOC107089214Uncharacterized protein. (297 aa)
LOC107104735Fragile X mental retardation, autosomal homolog 2. (546 aa)
kif21bKinesin family member 21B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1562 aa)
pink1PTEN induced kinase 1. (472 aa)
Cdk5r2Cyclin-dependent kinase 5, regulatory subunit 2b (p39). (296 aa)
shtn1Shootin 1. (355 aa)
LOC107089302Microtubule-associated protein. (416 aa)
LOC107084435Unc-5 netrin receptor C. (923 aa)
auts2Activator of transcription and developmental regulator AUTS2 a. (802 aa)
ABITRAMActin binding transcription modulator. (164 aa)
cdk5r1Cyclin-dependent kinase 5 activator. (307 aa)
myo9aMyosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2422 aa)
neo1Neogenin 1b. (1468 aa)
LOC107089413FERM domain-containing protein. (297 aa)
LOC107104893Dihydropyrimidinase like 3. (569 aa)
ENSCVAP00000002916RNAse_Pc domain-containing protein; Belongs to the pancreatic ribonuclease family. (138 aa)
ENSCVAP00000002342Uncharacterized protein. (534 aa)
LOC107095774BSD domain-containing protein. (338 aa)
LOC107095772Protein kinase domain-containing protein. (1007 aa)
LOC107095817Glycoprotein M6Aa. (278 aa)
LOC107093204Myosin IXAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2272 aa)
elavl4ELAV-like protein; Belongs to the RRM elav family. (447 aa)
LOC107086801Teashirt zinc finger homeobox 3b. (1226 aa)
unc5cUnc-5 netrin receptor C. (954 aa)
ENSCVAP00000032923Uncharacterized protein. (71 aa)
LOC107090732Uncharacterized protein. (1208 aa)
exoc8Exocyst complex component 8. (683 aa)
LOC107081512RRM domain-containing protein. (163 aa)
shank2SH3 and multiple ankyrin repeat domains 2a. (1413 aa)
LOC107085087Nerve growth factor receptor b. (509 aa)
LOC107093615Microtubule-associated protein. (507 aa)
ENSCVAP00000029632DCC netrin 1 receptor. (1336 aa)
LOC107102465TSC complex subunit 1b. (1258 aa)
Zpr1ZPR1 zinc finger. (223 aa)
gap43Growth associated protein 43. (238 aa)
ENSCVAP00000028481Protein kinase domain-containing protein. (510 aa)
ENSCVAP00000028286ANK_REP_REGION domain-containing protein. (1004 aa)
lrrtm1Leucine rich repeat transmembrane neuronal 1. (525 aa)
ELAVL2ELAV-like protein; Belongs to the RRM elav family. (401 aa)
syap1Synapse associated protein 1. (359 aa)
LOC107101840Cyclin-dependent kinase 5 activator. (331 aa)
LOC107104728Stathmin; Belongs to the stathmin family. (180 aa)
whrnWhirlin a. (878 aa)
LOC107104706Uncharacterized protein. (561 aa)
LOC107104490Uncharacterized protein. (387 aa)
EXOC4Exocyst complex component 4. (497 aa)
ENSCVAP00000023371Uncharacterized protein. (456 aa)
ninNinein (GSK3B interacting protein). (1355 aa)
copaCoatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (1222 aa)
rufy3RUN and FYVE domain containing 3. (637 aa)
LOC107092801Nerve growth factor receptor a (TNFR superfamily, member 16). (334 aa)
dtnbp1Dystrobrevin binding protein 1b. (220 aa)
l1camL1 cell adhesion molecule, paralog a. (1279 aa)
rtn4rReticulon 4 receptor. (467 aa)
LOC107100548ATCAY kinesin light chain interacting caytaxin a. (370 aa)
LOC107103977Exocyst complex component 4. (568 aa)
LOC107101662Uncharacterized protein. (330 aa)
flrt3Fibronectin leucine rich transmembrane 3. (650 aa)
LOC107102147Cyclin-dependent kinase-like 5. (1054 aa)
LOC107086848Abl-interactor 1b. (529 aa)
LOC107105186Cyclin-dependent kinase 5 activator. (324 aa)
cdk5Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily. (292 aa)
LOC107094234ATCAY kinesin light chain interacting caytaxin b. (355 aa)
c9orf72Zgc:100846. (462 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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