(19 nodes) Integral component of mitochondrial outer membrane network (Cyprinodon variegatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	tomm20	Translocase of outer mitochondrial membrane 20b. (146 aa)
	ENSCVAP00000005753	Zgc:109986. (262 aa)
	pink1	PTEN induced kinase 1. (472 aa)
	LOC107092899	Uncharacterized protein. (609 aa)
	rhot1	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (660 aa)
	fundc1	FUN14 domain containing 1. (152 aa)
	rhot2	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (618 aa)
	abcb6	ATP-binding cassette, sub-family B (MDR/TAP), member 6a. (852 aa)
	ENSCVAP00000011304	Uncharacterized protein. (147 aa)
	LOC107088947	Zgc:73226. (182 aa)
	LOC107101048	Mitochondrial E3 ubiquitin protein ligase 1a. (358 aa)
	bnip3	BCL2 interacting protein 3. (191 aa)
	ENSCVAP00000030765	Uncharacterized protein. (165 aa)
	tomm70	Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae). (578 aa)
	gdap1	Ganglioside induced differentiation associated protein 1. (408 aa)
	mul1	Mitochondrial E3 ubiquitin protein ligase 1b. (352 aa)
	LOC107089960	Zgc:110130. (287 aa)
	ENSCVAP00000008438	Uncharacterized protein. (88 aa)
	RHOT1	Ras homolog family member T1. (461 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCVAP00000005753	ENSCVAP00000008438	ENSCVAP00000005753	ENSCVAP00000008438	Zgc:109986.	Uncharacterized protein.	0.567
ENSCVAP00000005753	ENSCVAP00000030765	ENSCVAP00000005753	ENSCVAP00000030765	Zgc:109986.	Uncharacterized protein.	0.567
ENSCVAP00000005753	LOC107101048	ENSCVAP00000005753	ENSCVAP00000031336	Zgc:109986.	Mitochondrial E3 ubiquitin protein ligase 1a.	0.492
ENSCVAP00000005753	RHOT1	ENSCVAP00000005753	ENSCVAP00000008458	Zgc:109986.	Ras homolog family member T1.	0.567
ENSCVAP00000005753	mul1	ENSCVAP00000005753	ENSCVAP00000006273	Zgc:109986.	Mitochondrial E3 ubiquitin protein ligase 1b.	0.492
ENSCVAP00000005753	pink1	ENSCVAP00000005753	ENSCVAP00000006233	Zgc:109986.	PTEN induced kinase 1.	0.773
ENSCVAP00000005753	rhot1	ENSCVAP00000005753	ENSCVAP00000001820	Zgc:109986.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.567
ENSCVAP00000005753	rhot2	ENSCVAP00000005753	ENSCVAP00000000817	Zgc:109986.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.567
ENSCVAP00000005753	tomm70	ENSCVAP00000005753	ENSCVAP00000028493	Zgc:109986.	Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae).	0.931
ENSCVAP00000008438	ENSCVAP00000005753	ENSCVAP00000008438	ENSCVAP00000005753	Uncharacterized protein.	Zgc:109986.	0.567
ENSCVAP00000008438	LOC107101048	ENSCVAP00000008438	ENSCVAP00000031336	Uncharacterized protein.	Mitochondrial E3 ubiquitin protein ligase 1a.	0.440
ENSCVAP00000008438	mul1	ENSCVAP00000008438	ENSCVAP00000006273	Uncharacterized protein.	Mitochondrial E3 ubiquitin protein ligase 1b.	0.440
ENSCVAP00000008438	pink1	ENSCVAP00000008438	ENSCVAP00000006233	Uncharacterized protein.	PTEN induced kinase 1.	0.522
ENSCVAP00000008438	tomm20	ENSCVAP00000008438	ENSCVAP00000021267	Uncharacterized protein.	Translocase of outer mitochondrial membrane 20b.	0.645
ENSCVAP00000008438	tomm70	ENSCVAP00000008438	ENSCVAP00000028493	Uncharacterized protein.	Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae).	0.610
ENSCVAP00000030765	ENSCVAP00000005753	ENSCVAP00000030765	ENSCVAP00000005753	Uncharacterized protein.	Zgc:109986.	0.567
ENSCVAP00000030765	LOC107101048	ENSCVAP00000030765	ENSCVAP00000031336	Uncharacterized protein.	Mitochondrial E3 ubiquitin protein ligase 1a.	0.440
ENSCVAP00000030765	mul1	ENSCVAP00000030765	ENSCVAP00000006273	Uncharacterized protein.	Mitochondrial E3 ubiquitin protein ligase 1b.	0.452
ENSCVAP00000030765	pink1	ENSCVAP00000030765	ENSCVAP00000006233	Uncharacterized protein.	PTEN induced kinase 1.	0.522
ENSCVAP00000030765	tomm20	ENSCVAP00000030765	ENSCVAP00000021267	Uncharacterized protein.	Translocase of outer mitochondrial membrane 20b.	0.645