STRINGSTRING
LOC107085580 LOC107085580 ENSCVAP00000001504 ENSCVAP00000001504 LOC107093590 LOC107093590 rflnb rflnb LOC107088237 LOC107088237 pkdcc pkdcc chadl chadl glg1 glg1 sox5 sox5 LOC107089574 LOC107089574 rnf2 rnf2 ccn2 ccn2 LOC107092965 LOC107092965 GREM1 GREM1 mboat2 mboat2 trps1 trps1 LOC107095014 LOC107095014 LOC107092867 LOC107092867 LOC107090887 LOC107090887 LOC107089165 LOC107089165 RING1 RING1 LOC107095035 LOC107095035
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107085580SRY-box transcription factor 6. (776 aa)
ENSCVAP00000001504Uncharacterized protein. (111 aa)
LOC107093590Golgi glycoprotein 1a. (1120 aa)
rflnbRefilin B. (203 aa)
LOC107088237Fibroblast growth factor 18a; Belongs to the heparin-binding growth factors family. (210 aa)
pkdccProtein kinase domain containing, cytoplasmic b. (482 aa)
chadlUncharacterized protein. (750 aa)
glg1Golgi glycoprotein 1b. (1146 aa)
sox5SRY-box transcription factor 5. (759 aa)
LOC107089574Membrane bound O-acyltransferase domain containing 2b; Belongs to the membrane-bound acyltransferase family. (507 aa)
rnf2Ring finger protein 2. (342 aa)
ccn2Cellular communication network factor 2a. (346 aa)
LOC107092965Parathyroid hormone-like hormone a. (197 aa)
GREM1Gremlin. (184 aa)
mboat2Membrane bound O-acyltransferase domain containing 2a; Belongs to the membrane-bound acyltransferase family. (492 aa)
trps1Trichorhinophalangeal syndrome I. (1481 aa)
LOC107095014Uncharacterized protein. (134 aa)
LOC107092867Chondroadherin-like b. (748 aa)
LOC107090887HMG box domain-containing protein. (785 aa)
LOC107089165Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (210 aa)
RING1Ring finger protein 1. (389 aa)
LOC107095035Parathyroid hormone-like hormone b. (169 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: medium (66%) [HD]