114 items (Cyprinodon variegatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107087768	Si:ch73-335l21.1. (1267 aa)
	aprt	Adenine phosphoribosyltransferase. (181 aa)
	capn10	Calpain 10; Belongs to the peptidase C2 family. (662 aa)
	sirt1	Sirtuin 1. (691 aa)
	pik3r2	Phosphoinositide-3-kinase, regulatory subunit 2 (beta). (724 aa)
	LOC107083332	Sortilin. (716 aa)
	LOC107096800	Zinc finger protein 106a. (1582 aa)
	LOC107094480	Si:ch73-21k16.1. (609 aa)
	prkcz	Protein kinase C, zeta. (513 aa)
	prlh	Prolactin releasing hormone 2. (122 aa)
	ptpra	Receptor-type tyrosine-protein phosphatase alpha. (813 aa)
	LOC107093134	WD_REPEATS_REGION domain-containing protein. (1322 aa)
	PTPN2	Tyrosine-protein phosphatase non-receptor type. (410 aa)
	LOC107097827	RAB15, member RAS oncogene family. (210 aa)
	lpin2	Lipin 2. (949 aa)
	sp1	Sp1 transcription factor. (442 aa)
	LOC107095007	Trafficking regulator of GLUT4 (SLC2A4) 1a. (187 aa)
	insig2	Insulin-induced gene protein; Mediates feedback control of cholesterol synthesis. Belongs to the INSIG family. (242 aa)
	LOC107089253	Uncharacterized protein. (159 aa)
	ENSCVAP00000008839	Uncharacterized protein. (261 aa)
	meak7	MTOR associated protein, eak-7 homolog. (454 aa)
	grb2	Growth factor receptor-bound protein 2b. (217 aa)
	slc27a4	Solute carrier family 27 member 4. (643 aa)
	LOC107085938	RAB8A, member RAS oncogene family. (206 aa)
	errfi1	ERBB receptor feedback inhibitor 1a. (416 aa)
	zdhhc7	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (320 aa)
	PPARG	Peroxisome proliferator activated receptor gamma. (553 aa)
	cited1	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1. (145 aa)
	got1	Aspartate aminotransferase. (447 aa)
	LOC107091522	Insulin receptor substrate 4a. (1343 aa)
	akt1	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (473 aa)
	soga1	Suppressor of glucose, autophagy associated 1. (1881 aa)
	LOC107102947	Zgc:123305. (1022 aa)
	LOC107083639	Uncharacterized protein. (471 aa)
	gsk3b	Glycogen synthase kinase 3 beta, genome duplicate b; Belongs to the protein kinase superfamily. (425 aa)
	rb1	Retinoblastoma 1. (912 aa)
	LOC107102920	Apolipoprotein Da, duplicate 2; Belongs to the calycin superfamily. Lipocalin family. (229 aa)
	LOC107102921	Apolipoprotein Da, duplicate 2; Belongs to the calycin superfamily. Lipocalin family. (189 aa)
	LOC107102306	Si:ch211-284e13.4. (1153 aa)
	kcnq1	Potassium voltage-gated channel, KQT-like subfamily, member 1.1; Belongs to the potassium channel family. (618 aa)
	LOC107099926	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (479 aa)
	rab15	RAB15, member RAS oncogene family. (167 aa)
	LOC107093669	Serine and arginine rich splicing factor 5b. (325 aa)
	xbp1	X-box binding protein 1. (261 aa)
	LOC107099902	Uncharacterized protein. (471 aa)
	LOC107090513	Zgc:174895. (200 aa)
	slc39a14	Solute carrier family 39 member 14. (525 aa)
	scap	SREBF chaperone. (1317 aa)
	LOC107083482	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (470 aa)
	LOC107088377	Tyrosine-protein phosphatase non-receptor type. (405 aa)
	csrp3	Cysteine and glycine-rich protein 3 (cardiac LIM protein). (221 aa)
	ENSCVAP00000016241	DUF3496 domain-containing protein. (436 aa)
	gclc	Glutamate-cysteine ligase, catalytic subunit. (630 aa)
	wdtc1	WD and tetratricopeptide repeats 1. (668 aa)
	ENSCVAP00000017153	PDZ domain-containing protein. (224 aa)
	LOC107090180	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (438 aa)
	lpin1	Si:ch73-21k16.1. (890 aa)
	LOC107100834	Tyrosine-protein kinase receptor. (1366 aa)
	eef2k	Eukaryotic elongation factor 2 kinase. (769 aa)
	pdpk1	3-phosphoinositide dependent protein kinase 1b. (565 aa)
	rab13	Uncharacterized protein. (200 aa)
	slc27a1	Solute carrier family 27 member 1a. (648 aa)
	LOC107097409	Tyrosine-protein kinase receptor. (1171 aa)
	mtor	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2406 aa)
	Srsf6	Serine and arginine rich splicing factor 6. (261 aa)
	LOC107086691	Inhibitor_Mig-6 domain-containing protein. (366 aa)
	usf1	Upstream transcription factor 1. (275 aa)
	LOC107089487	Insulin-like growth factor 2b. (214 aa)
	ENSCVAP00000021961	RRM domain-containing protein. (292 aa)
	LOC107094044	Peroxisome proliferator-activated receptor alpha b. (468 aa)
	kbtbd2	Kelch repeat and BTB (POZ) domain containing 2. (631 aa)
	cpeb1	Cytoplasmic polyadenylation element binding protein 1b. (496 aa)
	eprs1	Glutamyl-prolyl-tRNA synthetase. (1566 aa)
	ENSCVAP00000023371	Uncharacterized protein. (456 aa)
	LOC107086777	Insulin receptor substrate 2a. (1061 aa)
	LOC107097814	Uncharacterized protein. (718 aa)
	LPIN2	Lipin 2. (755 aa)
	khk	Ketohexokinase. (301 aa)
	stxbp3	Syntaxin binding protein 3; Belongs to the STXBP/unc-18/SEC1 family. (592 aa)
	LOC107099546	Peroxisome proliferator-activated receptor alpha a. (454 aa)
	LOC107086949	Lipin 1. (956 aa)
	LOC107097106	Nuclear receptor coactivator 5. (443 aa)
	cpeb2	Cytoplasmic polyadenylation element binding protein 2. (736 aa)
	syap1	Synapse associated protein 1. (359 aa)
	gsk3a	Glycogen synthase kinase 3 alpha b; Belongs to the protein kinase superfamily. (440 aa)
	eif4ebp2	Eukaryotic translation initiation factor 4E binding protein 2. (114 aa)
	ENSCVAP00000028845	Uncharacterized protein. (93 aa)
	irs2	Insulin receptor substrate 2b. (1114 aa)
	ENSCVAP00000029198	V-akt murine thymoma viral oncogene homolog 3b. (181 aa)
	srsf5	Serine and arginine rich splicing factor 5a. (296 aa)
	LOC107101171	Sortilin. (522 aa)
	LOC107102465	TSC complex subunit 1b. (1258 aa)
	insr	Tyrosine-protein kinase receptor. (1362 aa)
	ghsr	Growth hormone secretagogue receptor b; Belongs to the G-protein coupled receptor 1 family. (371 aa)
	LOC107090730	Tyrosine-protein phosphatase non-receptor type. (434 aa)
	parp1	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (979 aa)
	rab10	RAB10, member RAS oncogene family. (201 aa)
	ogt	O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1. (1049 aa)
	hadha	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b; Belongs to the enoyl-CoA hydratase/isomerase family. (643 aa)
	OTOP1	Otopetrin 1. (543 aa)
	c2cd5	C2 calcium dependent domain containing 5. (1074 aa)
	ENSCVAP00000003289	Ion_trans domain-containing protein; Belongs to the potassium channel family. (314 aa)
	pcsk9	Proprotein convertase subtilisin/kexin type 9; Belongs to the peptidase S8 family. (669 aa)
	rab12	RAB12, member RAS oncogene family. (246 aa)
	LOC107093166	Tribbles pseudokinase 3. (350 aa)
	LOC107103895	Phosphoenolpyruvate carboxykinase 2 (mitochondrial). (635 aa)
	LOC107081991	Aspartate aminotransferase. (410 aa)
	LOC107102129	Multiple EGF-like-domains 8. (190 aa)
	INSIG1	Insulin-induced gene protein; Mediates feedback control of cholesterol synthesis. Belongs to the INSIG family. (275 aa)
	igf1r	Tyrosine-protein kinase receptor. (1416 aa)
	LOC107092854	Phosphoinositide-3-kinase, regulatory subunit 1 (alpha). (728 aa)
	LOC107095774	BSD domain-containing protein. (338 aa)
	rab8a	RAB8A, member RAS oncogene family. (206 aa)
	slc2a12	Solute carrier family 2 member 12; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (579 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCVAP00000003289	eprs1	ENSCVAP00000003289	ENSCVAP00000022480	Ion_trans domain-containing protein; Belongs to the potassium channel family.	Glutamyl-prolyl-tRNA synthetase.	0.493
ENSCVAP00000008839	ENSCVAP00000029198	ENSCVAP00000008839	ENSCVAP00000029198	Uncharacterized protein.	V-akt murine thymoma viral oncogene homolog 3b.	0.492
ENSCVAP00000008839	LOC107083482	ENSCVAP00000008839	ENSCVAP00000015997	Uncharacterized protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.492
ENSCVAP00000008839	LOC107086777	ENSCVAP00000008839	ENSCVAP00000024084	Uncharacterized protein.	Insulin receptor substrate 2a.	0.621
ENSCVAP00000008839	LOC107087768	ENSCVAP00000008839	ENSCVAP00000004232	Uncharacterized protein.	Si:ch73-335l21.1.	0.621
ENSCVAP00000008839	LOC107091522	ENSCVAP00000008839	ENSCVAP00000011000	Uncharacterized protein.	Insulin receptor substrate 4a.	0.621
ENSCVAP00000008839	LOC107097409	ENSCVAP00000008839	ENSCVAP00000020125	Uncharacterized protein.	Tyrosine-protein kinase receptor.	0.466
ENSCVAP00000008839	LOC107099926	ENSCVAP00000008839	ENSCVAP00000014231	Uncharacterized protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.492
ENSCVAP00000008839	LOC107100834	ENSCVAP00000008839	ENSCVAP00000018317	Uncharacterized protein.	Tyrosine-protein kinase receptor.	0.496
ENSCVAP00000008839	LOC107102306	ENSCVAP00000008839	ENSCVAP00000013030	Uncharacterized protein.	Si:ch211-284e13.4.	0.621
ENSCVAP00000008839	akt1	ENSCVAP00000008839	ENSCVAP00000011154	Uncharacterized protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.492
ENSCVAP00000008839	grb2	ENSCVAP00000008839	ENSCVAP00000009535	Uncharacterized protein.	Growth factor receptor-bound protein 2b.	0.778
ENSCVAP00000008839	igf1r	ENSCVAP00000008839	ENSCVAP00000001583	Uncharacterized protein.	Tyrosine-protein kinase receptor.	0.496
ENSCVAP00000008839	insr	ENSCVAP00000008839	ENSCVAP00000030091	Uncharacterized protein.	Tyrosine-protein kinase receptor.	0.496
ENSCVAP00000008839	irs2	ENSCVAP00000008839	ENSCVAP00000029130	Uncharacterized protein.	Insulin receptor substrate 2b.	0.621
ENSCVAP00000008839	pdpk1	ENSCVAP00000008839	ENSCVAP00000019109	Uncharacterized protein.	3-phosphoinositide dependent protein kinase 1b.	0.607
ENSCVAP00000017153	khk	ENSCVAP00000017153	ENSCVAP00000026263	PDZ domain-containing protein.	Ketohexokinase.	0.480
ENSCVAP00000017153	prkcz	ENSCVAP00000017153	ENSCVAP00000005661	PDZ domain-containing protein.	Protein kinase C, zeta.	0.504
ENSCVAP00000023371	ENSCVAP00000029198	ENSCVAP00000023371	ENSCVAP00000029198	Uncharacterized protein.	V-akt murine thymoma viral oncogene homolog 3b.	0.712
ENSCVAP00000023371	LOC107083482	ENSCVAP00000023371	ENSCVAP00000015997	Uncharacterized protein.	Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.	0.712