STRINGSTRING
LOC107093321 LOC107093321 phf2 phf2 kdm3b kdm3b kdm4a kdm4a kdm7a kdm7a kdm4c kdm4c ENSCVAP00000019490 ENSCVAP00000019490 ENSCVAP00000024399 ENSCVAP00000024399 kdm1a kdm1a LOC107102789 LOC107102789 phf8 phf8 ENSCVAP00000032681 ENSCVAP00000032681
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107093321Lysine (K)-specific demethylase 4B. (1222 aa)
phf2PHD finger protein 2. (991 aa)
kdm3bLysine (K)-specific demethylase 3B. (1788 aa)
kdm4aPHD-type domain-containing protein. (292 aa)
kdm7aLysine (K)-specific demethylase 7Ab. (847 aa)
kdm4cLysine (K)-specific demethylase 4C. (1534 aa)
ENSCVAP00000019490Lysine (K)-specific demethylase 4A, genome duplicate b. (357 aa)
ENSCVAP00000024399Uncharacterized protein. (271 aa)
kdm1aLysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (856 aa)
LOC107102789Uncharacterized protein. (595 aa)
phf8PHD finger protein 8. (1023 aa)
ENSCVAP00000032681Uncharacterized protein. (201 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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