(16 nodes) Regulation of heterotypic cell-cell adhesion network (Cyprinodon variegatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107100883	MARVEL domain-containing protein. (296 aa)
	LOC107091162	Uncharacterized protein. (284 aa)
	LOC107091163	Zgc:77748. (284 aa)
	ENSCVAP00000001689	Uncharacterized protein. (284 aa)
	il10	Interleukin 10. (184 aa)
	LOC107100882	Uncharacterized protein. (293 aa)
	LOC107099476	Interleukin-1. (247 aa)
	LOC107101748	Uncharacterized protein. (281 aa)
	LOC107086345	Myelin basic protein b. (140 aa)
	ENSCVAP00000017074	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (64 aa)
	LOC107101058	Uncharacterized protein. (282 aa)
	fgb	Fibrinogen beta chain. (495 aa)
	ENSCVAP00000018010	MARVEL domain-containing protein. (173 aa)
	LOC107085000	Uncharacterized protein. (277 aa)
	LOC107100889	Si:dkeyp-66d1.7. (294 aa)
	map2k5	Mitogen-activated protein kinase kinase 5; Belongs to the protein kinase superfamily. (415 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCVAP00000017074	LOC107099476	ENSCVAP00000017074	ENSCVAP00000011289	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	Interleukin-1.	0.862
ENSCVAP00000017074	il10	ENSCVAP00000017074	ENSCVAP00000003674	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	Interleukin 10.	0.747
LOC107099476	ENSCVAP00000017074	ENSCVAP00000011289	ENSCVAP00000017074	Interleukin-1.	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	0.862
LOC107099476	il10	ENSCVAP00000011289	ENSCVAP00000003674	Interleukin-1.	Interleukin 10.	0.823
fgb	map2k5	ENSCVAP00000017940	ENSCVAP00000024979	Fibrinogen beta chain.	Mitogen-activated protein kinase kinase 5; Belongs to the protein kinase superfamily.	0.502
il10	ENSCVAP00000017074	ENSCVAP00000003674	ENSCVAP00000017074	Interleukin 10.	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	0.747
il10	LOC107099476	ENSCVAP00000003674	ENSCVAP00000011289	Interleukin 10.	Interleukin-1.	0.823
map2k5	fgb	ENSCVAP00000024979	ENSCVAP00000017940	Mitogen-activated protein kinase kinase 5; Belongs to the protein kinase superfamily.	Fibrinogen beta chain.	0.502