68 items (Cyprinodon variegatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	wdr5	WD repeat domain 5. (333 aa)
	ENSCVAP00000030025	Si:ch211-195d17.2. (365 aa)
	LOC107101115	Lysine (K)-specific methyltransferase 2Ba. (2574 aa)
	LOC107104347	PHD finger protein 1. (472 aa)
	LOC107099247	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (636 aa)
	ENSCVAP00000032726	Uncharacterized protein. (336 aa)
	ENSCVAP00000027729	Multiple endocrine neoplasia I. (444 aa)
	ENSCVAP00000027615	PHD finger protein 19. (324 aa)
	LOC107097686	BHLH domain-containing protein. (2070 aa)
	rbbp4	Retinoblastoma binding protein 4. (424 aa)
	prdm4	PR domain containing 4. (879 aa)
	ino80c	INO80 complex subunit C. (204 aa)
	tex10	Testis expressed 10. (941 aa)
	LOC107086003	Uncharacterized protein. (267 aa)
	MAX	MYC associated factor X. (150 aa)
	ENSCVAP00000024223	TPR_REGION domain-containing protein. (368 aa)
	KMT2A	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (4453 aa)
	LOC107087701	VEFS-Box domain-containing protein. (665 aa)
	Chd8	Chromo domain-containing protein. (264 aa)
	kmt2b	Lysine (K)-specific methyltransferase 2Bb. (3841 aa)
	ruvbl1	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
	ENSCVAP00000022272	Metal response element binding transcription factor 2. (526 aa)
	LOC107099357	CXXC finger protein 1a. (478 aa)
	cxxc1	CXXC finger protein 1b. (561 aa)
	hcfc1	Host cell factor C1a. (1738 aa)
	jarid2	Jumonji, AT rich interactive domain 2b. (1451 aa)
	Kmt2c	Uncharacterized protein. (464 aa)
	EZH1	Enhancer of zeste 1 polycomb repressive complex 2 subunit. (768 aa)
	LOC107091290	SET domain containing 1B, histone lysine methyltransferase a. (1782 aa)
	Kmt2d	Uncharacterized protein. (406 aa)
	ENSCVAP00000018590	Uncharacterized protein. (362 aa)
	LOC107081535	Uncharacterized protein. (110 aa)
	rnf2	Ring finger protein 2. (342 aa)
	ash2l	Ash2 like, histone lysine methyltransferase complex subunit. (593 aa)
	kdm6a	Lysine (K)-specific demethylase 6A, like. (1457 aa)
	pelp1	Proline, glutamate and leucine rich protein 1. (1248 aa)
	ENSCVAP00000014960	BRCT domain-containing protein. (175 aa)
	ruvbl2	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (495 aa)
	max	Myc associated factor X. (180 aa)
	rbbp5	Retinoblastoma binding protein 5. (473 aa)
	LOC107102294	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (579 aa)
	Phf19	PHD-type domain-containing protein. (230 aa)
	ZNF335	Zinc finger protein 335. (674 aa)
	Znf335	Uncharacterized protein. (859 aa)
	setd1a	SET domain containing 1A, histone lysine methyltransferase. (2177 aa)
	LOC107100689	Zgc:103508. (205 aa)
	ENSCVAP00000008602	Uncharacterized protein. (692 aa)
	RING1	Ring finger protein 1. (389 aa)
	LOC107087592	C2H2-type domain-containing protein. (166 aa)
	ncoa6	Nuclear receptor coactivator 6. (2394 aa)
	kdm6b	Lysine (K)-specific demethylase 6B, a. (2093 aa)
	LOC107082570	Lysine (K)-specific demethylase 6B, b. (1772 aa)
	LOC107103115	WD_REPEATS_REGION domain-containing protein. (315 aa)
	phf20	PHD finger protein 20, a. (1005 aa)
	dpy30	Dpy-30 histone methyltransferase complex regulatory subunit. (105 aa)
	ENSCVAP00000006795	Uncharacterized protein. (334 aa)
	ENSCVAP00000006612	JmjC domain-containing protein. (611 aa)
	prpf31	PRP31 pre-mRNA processing factor 31 homolog (yeast). (508 aa)
	ezh2	Enhancer of zeste 2 polycomb repressive complex 2 subunit. (761 aa)
	wdr82	WD repeat domain 82. (313 aa)
	prmt5	Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily. (653 aa)
	hcfc2	Host cell factor C2. (683 aa)
	ENSCVAP00000000947	Uncharacterized protein. (279 aa)
	mcrs1	Microspherule protein 1. (430 aa)
	LOC107093481	SUZ12 polycomb repressive complex 2 subunit b. (680 aa)
	eed	Embryonic ectoderm development. (443 aa)
	ENSCVAP00000027617	Uncharacterized protein. (138 aa)
	pagr1	PAXIP1 associated glutamate-rich protein 1. (277 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Chd8	ino80c	ENSCVAP00000022976	ENSCVAP00000025075	Chromo domain-containing protein.	INO80 complex subunit C.	0.603
Chd8	mcrs1	ENSCVAP00000022976	ENSCVAP00000000832	Chromo domain-containing protein.	Microspherule protein 1.	0.469
Chd8	rbbp4	ENSCVAP00000022976	ENSCVAP00000026884	Chromo domain-containing protein.	Retinoblastoma binding protein 4.	0.481
Chd8	ruvbl1	ENSCVAP00000022976	ENSCVAP00000022564	Chromo domain-containing protein.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.674
Chd8	ruvbl2	ENSCVAP00000022976	ENSCVAP00000014701	Chromo domain-containing protein.	RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.	0.523
ENSCVAP00000000947	KMT2A	ENSCVAP00000000947	ENSCVAP00000023952	Uncharacterized protein.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	0.592
ENSCVAP00000000947	LOC107081535	ENSCVAP00000000947	ENSCVAP00000018140	Uncharacterized protein.	Uncharacterized protein.	0.711
ENSCVAP00000000947	LOC107091290	ENSCVAP00000000947	ENSCVAP00000018734	Uncharacterized protein.	SET domain containing 1B, histone lysine methyltransferase a.	0.747
ENSCVAP00000000947	LOC107099357	ENSCVAP00000000947	ENSCVAP00000020544	Uncharacterized protein.	CXXC finger protein 1a.	0.582
ENSCVAP00000000947	LOC107103115	ENSCVAP00000000947	ENSCVAP00000007144	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.596
ENSCVAP00000000947	MAX	ENSCVAP00000000947	ENSCVAP00000024302	Uncharacterized protein.	MYC associated factor X.	0.404
ENSCVAP00000000947	ash2l	ENSCVAP00000000947	ENSCVAP00000017212	Uncharacterized protein.	Ash2 like, histone lysine methyltransferase complex subunit.	0.835
ENSCVAP00000000947	cxxc1	ENSCVAP00000000947	ENSCVAP00000020046	Uncharacterized protein.	CXXC finger protein 1b.	0.582
ENSCVAP00000000947	dpy30	ENSCVAP00000000947	ENSCVAP00000006931	Uncharacterized protein.	Dpy-30 histone methyltransferase complex regulatory subunit.	0.668
ENSCVAP00000000947	hcfc1	ENSCVAP00000000947	ENSCVAP00000020034	Uncharacterized protein.	Host cell factor C1a.	0.900
ENSCVAP00000000947	hcfc2	ENSCVAP00000000947	ENSCVAP00000001660	Uncharacterized protein.	Host cell factor C2.	0.902
ENSCVAP00000000947	max	ENSCVAP00000000947	ENSCVAP00000014509	Uncharacterized protein.	Myc associated factor X.	0.404
ENSCVAP00000000947	mcrs1	ENSCVAP00000000947	ENSCVAP00000000832	Uncharacterized protein.	Microspherule protein 1.	0.798
ENSCVAP00000000947	phf20	ENSCVAP00000000947	ENSCVAP00000006970	Uncharacterized protein.	PHD finger protein 20, a.	0.711
ENSCVAP00000000947	rbbp5	ENSCVAP00000000947	ENSCVAP00000013564	Uncharacterized protein.	Retinoblastoma binding protein 5.	0.772