14 items (Cyprinodon variegatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107087290	Huntingtin interacting protein 1 related b. (1067 aa)
	ap2m1	AP-2 complex subunit mu; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but i [...] (442 aa)
	hip1	Huntingtin interacting protein 1. (990 aa)
	LOC107101473	Alpha_adaptinC2 domain-containing protein. (841 aa)
	LOC107086061	Uncharacterized protein. (1213 aa)
	ap1g1	AP-1 complex subunit gamma. (820 aa)
	LOC107103921	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...] (948 aa)
	ap2s1	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (142 aa)
	ldlrap1	Low density lipoprotein receptor adaptor protein 1b. (323 aa)
	LOC107093644	Low density lipoprotein receptor adaptor protein 1a. (307 aa)
	ENSCVAP00000014770	Uncharacterized protein. (109 aa)
	LOC107089300	Stonin-1; May be involved in the endocytic machinery. (706 aa)
	LOC107087706	AP-1 complex subunit gamma. (798 aa)
	dab2	DAB adaptor protein 2. (767 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCVAP00000014770	LOC107087706	ENSCVAP00000014770	ENSCVAP00000004960	Uncharacterized protein.	AP-1 complex subunit gamma.	0.532
ENSCVAP00000014770	LOC107103921	ENSCVAP00000014770	ENSCVAP00000021034	Uncharacterized protein.	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	0.566
ENSCVAP00000014770	ap1g1	ENSCVAP00000014770	ENSCVAP00000022539	Uncharacterized protein.	AP-1 complex subunit gamma.	0.532
LOC107086061	LOC107087706	ENSCVAP00000023476	ENSCVAP00000004960	Uncharacterized protein.	AP-1 complex subunit gamma.	0.516
LOC107086061	LOC107103921	ENSCVAP00000023476	ENSCVAP00000021034	Uncharacterized protein.	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	0.564
LOC107086061	ap1g1	ENSCVAP00000023476	ENSCVAP00000022539	Uncharacterized protein.	AP-1 complex subunit gamma.	0.516
LOC107086061	ldlrap1	ENSCVAP00000023476	ENSCVAP00000016700	Uncharacterized protein.	Low density lipoprotein receptor adaptor protein 1b.	0.483
LOC107087290	LOC107087706	ENSCVAP00000019672	ENSCVAP00000004960	Huntingtin interacting protein 1 related b.	AP-1 complex subunit gamma.	0.532
LOC107087290	LOC107103921	ENSCVAP00000019672	ENSCVAP00000021034	Huntingtin interacting protein 1 related b.	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	0.566
LOC107087290	ap1g1	ENSCVAP00000019672	ENSCVAP00000022539	Huntingtin interacting protein 1 related b.	AP-1 complex subunit gamma.	0.532
LOC107087290	ldlrap1	ENSCVAP00000019672	ENSCVAP00000016700	Huntingtin interacting protein 1 related b.	Low density lipoprotein receptor adaptor protein 1b.	0.483
LOC107087706	ENSCVAP00000014770	ENSCVAP00000004960	ENSCVAP00000014770	AP-1 complex subunit gamma.	Uncharacterized protein.	0.532
LOC107087706	LOC107086061	ENSCVAP00000004960	ENSCVAP00000023476	AP-1 complex subunit gamma.	Uncharacterized protein.	0.516
LOC107087706	LOC107087290	ENSCVAP00000004960	ENSCVAP00000019672	AP-1 complex subunit gamma.	Huntingtin interacting protein 1 related b.	0.532
LOC107087706	LOC107103921	ENSCVAP00000004960	ENSCVAP00000021034	AP-1 complex subunit gamma.	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	0.515
LOC107087706	ap1g1	ENSCVAP00000004960	ENSCVAP00000022539	AP-1 complex subunit gamma.	AP-1 complex subunit gamma.	0.901
LOC107087706	ap2m1	ENSCVAP00000004960	ENSCVAP00000031359	AP-1 complex subunit gamma.	AP-2 complex subunit mu; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but i [...]	0.905
LOC107087706	ap2s1	ENSCVAP00000004960	ENSCVAP00000017307	AP-1 complex subunit gamma.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.900
LOC107087706	hip1	ENSCVAP00000004960	ENSCVAP00000024441	AP-1 complex subunit gamma.	Huntingtin interacting protein 1.	0.532
LOC107093644	LOC107103921	ENSCVAP00000015162	ENSCVAP00000021034	Low density lipoprotein receptor adaptor protein 1a.	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	0.569