(19 nodes) Peptidyl-threonine dephosphorylation network (Cyprinodon variegatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107082778	Protein phosphatase, Mg2+/Mn2+ dependent, 1K. (376 aa)
	LOC107085550	Protein phosphatase, Mg2+/Mn2+ dependent, 1Bb. (475 aa)
	pdp1	Pyruvate dehyrogenase phosphatase catalytic subunit 1. (521 aa)
	ppm1g	Protein phosphatase, Mg2+/Mn2+ dependent, 1G. (558 aa)
	pdp2	Putative pyruvate dehydrogenase phosphatase isoenzyme 2. (527 aa)
	ppm1b	Protein phosphatase, Mg2+/Mn2+ dependent, 1Ba. (400 aa)
	ENSCVAP00000031718	PPM-type phosphatase domain-containing protein. (174 aa)
	LOC107087880	Protein phosphatase, Mg2+/Mn2+ dependent, 1Nb (putative). (430 aa)
	ppm1f	Protein phosphatase, Mg2+/Mn2+ dependent, 1F. (402 aa)
	LOC107095798	Protein phosphatase, Mg2+/Mn2+ dependent, 1Db. (564 aa)
	dusp10	Dual specificity phosphatase 10; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (472 aa)
	PPM1D	PPM-type phosphatase domain-containing protein. (351 aa)
	LOC107094175	Protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative). (435 aa)
	LOC107103553	Si:ch211-15p9.2. (515 aa)
	ENSCVAP00000007952	PPM-type phosphatase domain-containing protein. (184 aa)
	LOC107082582	Si:dkey-175m17.7. (879 aa)
	LOC107089933	PGAM family member 5, serine/threonine protein phosphatase, mitochondrial. (301 aa)
	ppm1a	Protein phosphatase, Mg2+/Mn2+ dependent, 1Aa. (386 aa)
	ppm1e	Protein phosphatase, Mg2+/Mn2+ dependent, 1E. (617 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCVAP00000031718	PPM1D	ENSCVAP00000031718	ENSCVAP00000020806	PPM-type phosphatase domain-containing protein.	PPM-type phosphatase domain-containing protein.	0.891
LOC107085550	ppm1b	ENSCVAP00000022744	ENSCVAP00000026964	Protein phosphatase, Mg2+/Mn2+ dependent, 1Bb.	Protein phosphatase, Mg2+/Mn2+ dependent, 1Ba.	0.901
LOC107087880	LOC107094175	ENSCVAP00000032202	ENSCVAP00000017377	Protein phosphatase, Mg2+/Mn2+ dependent, 1Nb (putative).	Protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative).	0.901
LOC107087880	ppm1a	ENSCVAP00000032202	ENSCVAP00000006049	Protein phosphatase, Mg2+/Mn2+ dependent, 1Nb (putative).	Protein phosphatase, Mg2+/Mn2+ dependent, 1Aa.	0.902
LOC107094175	LOC107087880	ENSCVAP00000017377	ENSCVAP00000032202	Protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative).	Protein phosphatase, Mg2+/Mn2+ dependent, 1Nb (putative).	0.901
LOC107094175	ppm1a	ENSCVAP00000017377	ENSCVAP00000006049	Protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative).	Protein phosphatase, Mg2+/Mn2+ dependent, 1Aa.	0.902
LOC107095798	PPM1D	ENSCVAP00000020795	ENSCVAP00000020806	Protein phosphatase, Mg2+/Mn2+ dependent, 1Db.	PPM-type phosphatase domain-containing protein.	0.903
PPM1D	ENSCVAP00000031718	ENSCVAP00000020806	ENSCVAP00000031718	PPM-type phosphatase domain-containing protein.	PPM-type phosphatase domain-containing protein.	0.891
PPM1D	LOC107095798	ENSCVAP00000020806	ENSCVAP00000020795	PPM-type phosphatase domain-containing protein.	Protein phosphatase, Mg2+/Mn2+ dependent, 1Db.	0.903
ppm1a	LOC107087880	ENSCVAP00000006049	ENSCVAP00000032202	Protein phosphatase, Mg2+/Mn2+ dependent, 1Aa.	Protein phosphatase, Mg2+/Mn2+ dependent, 1Nb (putative).	0.902
ppm1a	LOC107094175	ENSCVAP00000006049	ENSCVAP00000017377	Protein phosphatase, Mg2+/Mn2+ dependent, 1Aa.	Protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative).	0.902
ppm1b	LOC107085550	ENSCVAP00000026964	ENSCVAP00000022744	Protein phosphatase, Mg2+/Mn2+ dependent, 1Ba.	Protein phosphatase, Mg2+/Mn2+ dependent, 1Bb.	0.901