STRINGSTRING
brd1 brd1 LOC107086721 LOC107086721 sgf29 sgf29 LOC107089342 LOC107089342 Dr1 Dr1 kat2a kat2a LOC107104488 LOC107104488 mbip mbip zzz3 zzz3 brpf1 brpf1 yeats2 yeats2 meaf6 meaf6 kat14 kat14 BRD1 BRD1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
brd1Bromodomain containing 1a. (1204 aa)
LOC107086721Bromodomain and PHD finger containing, 3b. (1245 aa)
sgf29SAGA complex associated factor 29. (290 aa)
LOC107089342Bromodomain and PHD finger containing, 3a. (1236 aa)
Dr1Down-regulator of transcription 1. (159 aa)
kat2aHistone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (793 aa)
LOC107104488N-acetyltransferase domain-containing protein. (787 aa)
mbipMAP3K12 binding inhibitory protein 1. (336 aa)
zzz3Zinc finger, ZZ-type containing 3. (839 aa)
brpf1Uncharacterized protein. (1279 aa)
yeats2YEATS domain containing 2. (1437 aa)
meaf6MYST/Esa1-associated factor 6. (173 aa)
kat14Lysine acetyltransferase 14. (787 aa)
BRD1Bromodomain containing 1. (1070 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.