STRINGSTRING
LOC107103699 LOC107103699 ddit3 ddit3 LOC107100813 LOC107100813 tmem182 tmem182 LOC107103272 LOC107103272 ankrd1 ankrd1 id3 id3 cxcl14 cxcl14 sostdc1 sostdc1 ENSCVAP00000017074 ENSCVAP00000017074 sra1 sra1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107103699Transforming growth factor beta; Belongs to the TGF-beta family. (349 aa)
ddit3DNA-damage-inducible transcript 3. (309 aa)
LOC107100813Growth differentiation factor 11. (388 aa)
tmem182Transmembrane protein 182a. (248 aa)
LOC107103272Uncharacterized protein. (207 aa)
ankrd1ANK_REP_REGION domain-containing protein. (186 aa)
id3Inhibitor of DNA binding 3. (116 aa)
cxcl14Chemokine (C-X-C motif) ligand 14. (99 aa)
sostdc1Sclerostin domain containing 1a. (219 aa)
ENSCVAP00000017074TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (64 aa)
sra1SRA1 domain-containing protein. (262 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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