STRINGSTRING
LOC107101806 LOC107101806 LOC107084241 LOC107084241 bmpr2 bmpr2 SRC SRC acp5 acp5 LOC107103699 LOC107103699 LOC107101899 LOC107101899 cav1 cav1 lrrk1 lrrk1 LOC107098486 LOC107098486 LOC107095804 LOC107095804 sema3c sema3c LOC107083120 LOC107083120 tbx5 tbx5 LOC107086215 LOC107086215 tgfb3 tgfb3 nox4 nox4 elf3 elf3 BAX BAX wnt16 wnt16 ENSCVAP00000024330 ENSCVAP00000024330 ENSCVAP00000024289 ENSCVAP00000024289 LOC107096737 LOC107096737 LOC107103972 LOC107103972 LOC107094694 LOC107094694 LOC107089626 LOC107089626 lrp6 lrp6 atg5 atg5 ncdn ncdn LOC107102826 LOC107102826 plg plg LOC107102263 LOC107102263 lgr4 lgr4 LOC107092007 LOC107092007 crb1 crb1 pdlim7 pdlim7 ENSCVAP00000011304 ENSCVAP00000011304 LOC107090355 LOC107090355
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107101806Si:dkey-193c22.2. (2407 aa)
LOC107084241Insulin-like growth factor binding protein 5a. (250 aa)
bmpr2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1052 aa)
SRCTyrosine-protein kinase. (551 aa)
acp5Tartrate-resistant acid phosphatase type 5. (333 aa)
LOC107103699Transforming growth factor beta; Belongs to the TGF-beta family. (349 aa)
LOC107101899TNF superfamily member 11; Belongs to the tumor necrosis factor family. (267 aa)
cav1Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (180 aa)
lrrk1Leucine-rich repeat kinase 1. (1743 aa)
LOC107098486Uncharacterized protein. (1385 aa)
LOC107095804Chondroitin sulfate proteoglycan 4. (2290 aa)
sema3cSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C; Belongs to the semaphorin family. (758 aa)
LOC107083120Transforming growth factor beta; Belongs to the TGF-beta family. (407 aa)
tbx5T-box transcription factor 5a. (524 aa)
LOC107086215Insulin-like growth factor binding protein 5a. (267 aa)
tgfb3Transforming growth factor beta; Belongs to the TGF-beta family. (400 aa)
nox4FAD-binding FR-type domain-containing protein. (530 aa)
elf3E74-like factor 3 (ets domain transcription factor, epithelial-specific ). (342 aa)
BAXBCL2 associated X, apoptosis regulator. (191 aa)
wnt16Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (357 aa)
ENSCVAP00000024330Uncharacterized protein. (680 aa)
ENSCVAP00000024289Endothelin receptor type Ab. (353 aa)
LOC107096737Low density lipoprotein receptor-related protein 5. (1633 aa)
LOC107103972Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (739 aa)
LOC107094694Ephrin RBD domain-containing protein; Belongs to the ephrin family. (221 aa)
LOC107089626R-spondin 3. (328 aa)
lrp6Low-density lipoprotein receptor-related protein; Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Belongs to the LDLR family. (1609 aa)
atg5Autophagy protein 5; Involved in autophagic vesicle formation. (275 aa)
ncdnNeurochondrin. (756 aa)
LOC107102826Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family. (442 aa)
plgPlasminogen; Plasmin dissolves the fibrin of blood clots and acts as a proteolytic factor in a variety of other processes including embryonic development, tissue remodeling, tumor invasion, and inflammation. In ovulation, weakens the walls of the Graafian follicle. It activates the urokinase-type plasminogen activator, collagenases and several complement zymogens, such as C1 and C5. Cleavage of fibronectin and laminin leads to cell detachment and apoptosis. Also cleaves fibrin, thrombospondin and von Willebrand factor. Its role in tissue remodeling and tumor invasion may be modulated b [...] (799 aa)
LOC107102263Crumbs cell polarity complex component 2b. (1378 aa)
lgr4Leucine-rich repeat containing G protein-coupled receptor 4. (977 aa)
LOC107092007Uncharacterized protein. (2404 aa)
crb1Crumbs cell polarity complex component 1. (1294 aa)
pdlim7PDZ and LIM domain 7. (423 aa)
ENSCVAP00000011304Uncharacterized protein. (147 aa)
LOC107090355Zgc:171965; Belongs to the G-protein coupled receptor 1 family. (443 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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