STRINGSTRING
LOC107103885 LOC107103885 LOC107099476 LOC107099476 ENSCVAP00000017074 ENSCVAP00000017074 LOC107099240 LOC107099240
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107103885Vascular endothelial growth factor c; Belongs to the PDGF/VEGF growth factor family. (360 aa)
LOC107099476Interleukin-1. (247 aa)
ENSCVAP00000017074TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (64 aa)
LOC107099240Methyl CpG binding protein 2. (937 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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