STRINGSTRING
crispld1 crispld1 dkk1 dkk1 ENSCVAP00000030005 ENSCVAP00000030005 specc1l specc1l csrnp1 csrnp1 plekha1 plekha1 ep300 ep300 LOC107091689 LOC107091689 LOC107092878 LOC107092878 pitx2 pitx2 crispld2 crispld2 LOC107083120 LOC107083120 LOC107096480 LOC107096480 ankrd11 ankrd11 LOC107103699 LOC107103699 LOC107098561 LOC107098561 sgpl1 sgpl1 LOC107083869 LOC107083869 msx1 msx1 lef1 lef1 tgfb3 tgfb3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
crispld1Cysteine-rich secretory protein LCCL domain containing 1a. (515 aa)
dkk1Dickkopf WNT signaling pathway inhibitor 1a. (261 aa)
ENSCVAP00000030005Asp-B-Hydro_N domain-containing protein. (289 aa)
specc1lSperm antigen with calponin homology and coiled-coil domains 1-like a. (987 aa)
csrnp1Cysteine-serine-rich nuclear protein 1a. (558 aa)
plekha1Pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1b. (393 aa)
ep300E1A binding protein p300 b. (2766 aa)
LOC107091689Cysteine-rich secretory protein LCCL domain containing 1b. (508 aa)
LOC107092878E1A binding protein p300 a. (2648 aa)
pitx2Homeobox protein. (312 aa)
crispld2Cysteine-rich secretory protein LCCL domain containing 2. (517 aa)
LOC107083120Transforming growth factor beta; Belongs to the TGF-beta family. (407 aa)
LOC107096480Cysteine-serine-rich nuclear protein 1b. (573 aa)
ankrd11Ankyrin repeat domain 11. (2823 aa)
LOC107103699Transforming growth factor beta; Belongs to the TGF-beta family. (349 aa)
LOC107098561Si:ch211-195o20.7. (588 aa)
sgpl1Sphingosine-1-phosphate lyase 1. (565 aa)
LOC107083869Uncharacterized protein. (664 aa)
msx1Muscle segment homeobox 1a. (277 aa)
lef1Lymphoid enhancer-binding factor 1. (378 aa)
tgfb3Transforming growth factor beta; Belongs to the TGF-beta family. (400 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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