STRINGSTRING
phb phb LOC107092878 LOC107092878 rnf14 rnf14 rnf6 rnf6 ep300 ep300 ncor2 ncor2 prmt2 prmt2 dab2 dab2 msc msc tcf21 tcf21 ENSCVAP00000002779 ENSCVAP00000002779 Ncor1 Ncor1 sirt1 sirt1 LOC107096594 LOC107096594
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
phbProhibitin. (276 aa)
LOC107092878E1A binding protein p300 a. (2648 aa)
rnf14RBR-type E3 ubiquitin transferase. (446 aa)
rnf6Ring finger protein (C3H2C3 type) 6. (715 aa)
ep300E1A binding protein p300 b. (2766 aa)
ncor2Nuclear receptor corepressor 2. (2268 aa)
prmt2Protein arginine methyltransferase 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (415 aa)
dab2DAB adaptor protein 2. (767 aa)
mscMusculin (activated B-cell factor-1). (145 aa)
tcf21Transcription factor 21. (182 aa)
ENSCVAP00000002779GPS2_interact domain-containing protein. (204 aa)
Ncor1Uncharacterized protein. (946 aa)
sirt1Sirtuin 1. (691 aa)
LOC107096594RBR-type E3 ubiquitin transferase. (504 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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