STRINGSTRING
LOC107088435 LOC107088435 LOC107089187 LOC107089187 LOC107088237 LOC107088237 pkdcc pkdcc tapt1 tapt1 sox5 sox5 bmp4 bmp4 LOC107103972 LOC107103972 LOC107090887 LOC107090887 LOC107089165 LOC107089165 bmpr2 bmpr2 LOC107096868 LOC107096868 LOC107085580 LOC107085580 ccn1 ccn1 bmp10 bmp10
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107088435Bone morphogenetic protein 10, like. (462 aa)
LOC107089187Transmembrane anterior posterior transformation 1a. (591 aa)
LOC107088237Fibroblast growth factor 18a; Belongs to the heparin-binding growth factors family. (210 aa)
pkdccProtein kinase domain containing, cytoplasmic b. (482 aa)
tapt1Transmembrane anterior posterior transformation 1b. (571 aa)
sox5SRY-box transcription factor 5. (759 aa)
bmp4Bone morphogenetic protein 4. (399 aa)
LOC107103972Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (739 aa)
LOC107090887HMG box domain-containing protein. (785 aa)
LOC107089165Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (210 aa)
bmpr2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1052 aa)
LOC107096868Bone morphogenetic protein 16. (476 aa)
LOC107085580SRY-box transcription factor 6. (776 aa)
ccn1Cellular communication network factor 1. (375 aa)
bmp10Bone morphogenetic protein 10. (487 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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