STRINGSTRING
ENSCVAP00000000186 ENSCVAP00000000186 zbtb1 zbtb1 zranb3 zranb3 tab2 tab2 tab3 tab3 otud7a otud7a rnf169 rnf169 otud7b otud7b LOC107091355 LOC107091355 ENSCVAP00000027620 ENSCVAP00000027620 ENSCVAP00000026994 ENSCVAP00000026994 ENSCVAP00000025291 ENSCVAP00000025291 sqstm1 sqstm1 zranb1 zranb1 Sprtn Sprtn rnf31 rnf31 LOC107096228 LOC107096228 tnfaip3 tnfaip3 rnf168 rnf168 atrip atrip
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSCVAP00000000186GSAP-16 domain-containing protein. (178 aa)
zbtb1Zinc finger and BTB domain containing 1. (671 aa)
zranb3Zinc finger, RAN-binding domain containing 3. (703 aa)
tab2TGF-beta activated kinase 1 (MAP3K7) binding protein 2. (752 aa)
tab3TGF-beta activated kinase 1 (MAP3K7) binding protein 3. (598 aa)
otud7aOTU deubiquitinase 7A. (958 aa)
rnf169Ring finger protein 169. (572 aa)
otud7bOTU deubiquitinase 7B. (916 aa)
LOC107091355Zinc finger, RAN-binding domain containing 1b. (757 aa)
ENSCVAP00000027620Poly [ADP-ribose] polymerase. (649 aa)
ENSCVAP00000026994Uncharacterized protein. (472 aa)
ENSCVAP00000025291Uncharacterized protein. (465 aa)
sqstm1Sequestosome 1. (435 aa)
zranb1Uncharacterized protein. (707 aa)
SprtnSprT-like N-terminal domain. (242 aa)
rnf31Ring finger protein 31. (1112 aa)
LOC107096228Optineurin. (527 aa)
tnfaip3Tumor necrosis factor, alpha-induced protein 3. (822 aa)
rnf168E3 ubiquitin-protein ligase RNF168; E3 ubiquitin-protein ligase required for accumulation of repair proteins to sites of DNA damage. Acts with UBE2N/UBC13 to amplify the RNF8-dependent histone ubiquitination. Recruited to sites of DNA damage at double-strand breaks (DSBs) by binding to ubiquitinated histone H2A and ubiquitinates histone H2A and H2AX, leading to amplify the RNF8-dependent H2A ubiquitination and promoting the formation of 'Lys-63'-linked ubiquitin conjugates. This leads to concentrate ubiquitinated histones H2A and H2AX at DNA lesions to the threshold required for recrui [...] (426 aa)
atripUncharacterized protein. (773 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.