STRINGSTRING
LOC107095642 LOC107095642 bhlhe41 bhlhe41 prmt5 prmt5 LOC107104192 LOC107104192 LOC107100736 LOC107100736 LOC107088827 LOC107088827 LOC107091523 LOC107091523 LOC107097611 LOC107097611 snai2 snai2 LOC107084042 LOC107084042 tcf15 tcf15 scx scx LOC107099235 LOC107099235 TFAP4 TFAP4 LOC107098020 LOC107098020 ENSCVAP00000020672 ENSCVAP00000020672 tfap4 tfap4 myog myog LOC107098382 LOC107098382 LOC107092283 LOC107092283 LOC107092269 LOC107092269 ARNTL2 ARNTL2 nr1d1 nr1d1 LOC107097609 LOC107097609 ENSCVAP00000027909 ENSCVAP00000027909 LOC107082332 LOC107082332 LOC107096961 LOC107096961 LOC107082815 LOC107082815 neurog1 neurog1 BHLHE40 BHLHE40 tcf21 tcf21 msc msc
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107095642Transcription factor 12. (645 aa)
bhlhe41Basic helix-loop-helix family, member e41. (424 aa)
prmt5Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily. (653 aa)
LOC107104192Aryl hydrocarbon receptor nuclear translocator-like 2. (579 aa)
LOC107100736Uncharacterized protein. (75 aa)
LOC107088827Uncharacterized protein. (420 aa)
LOC107091523Nuclear receptor subfamily 1, group D, member 4a. (585 aa)
LOC107097611Uncharacterized protein. (941 aa)
snai2Snail family zinc finger 2. (268 aa)
LOC107084042Circadian associated repressor of transcription a. (310 aa)
tcf15Transcription factor 15. (179 aa)
scxScleraxis bHLH transcription factor a. (218 aa)
LOC107099235Uncharacterized protein. (346 aa)
TFAP4Transcription factor AP-4. (336 aa)
LOC107098020Aryl hydrocarbon receptor nuclear translocator-like 1a. (586 aa)
ENSCVAP00000020672Uncharacterized protein. (203 aa)
tfap4Transcription factor AP-4 (activating enhancer binding protein 4). (322 aa)
myogMyogenin. (250 aa)
LOC107098382Transcription factor 3b. (648 aa)
LOC107092283Aryl hydrocarbon receptor 2. (919 aa)
LOC107092269Aryl hydrocarbon receptor 1b. (828 aa)
ARNTL2Aryl hydrocarbon receptor nuclear translocator like 2. (612 aa)
nr1d1Nuclear receptor subfamily 1, group d, member 1. (618 aa)
LOC107097609Aryl hydrocarbon receptor 1b. (922 aa)
ENSCVAP00000027909Uncharacterized protein. (89 aa)
LOC107082332Basic helix-loop-helix family, member e40. (402 aa)
LOC107096961Transcription factor 3a. (628 aa)
LOC107082815Si:ch211-246m6.4. (172 aa)
neurog1Neurogenin 1. (198 aa)
BHLHE40Basic helix-loop-helix family member e40. (428 aa)
tcf21Transcription factor 21. (182 aa)
mscMusculin (activated B-cell factor-1). (145 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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