STRINGSTRING
ambra1 ambra1 vps13d vps13d Park2 Park2 ENSCVAP00000007456 ENSCVAP00000007456 htt htt vdac1 vdac1 pink1 pink1 fbxo7 fbxo7 LOC107102590 LOC107102590
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ambra1Autophagy/beclin-1 regulator 1b. (1374 aa)
vps13dVacuolar protein sorting 13 homolog D. (4296 aa)
Park2RBR-type E3 ubiquitin transferase. (71 aa)
ENSCVAP00000007456Uncharacterized protein. (158 aa)
httHuntingtin. (2595 aa)
vdac1Voltage-dependent anion channel 1. (283 aa)
pink1PTEN induced kinase 1. (472 aa)
fbxo7F-box protein 7. (469 aa)
LOC107102590Translocator protein. (162 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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