38 items (Cyprinodon variegatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107097009	Si:ch211-180f4.1. (588 aa)
	ENSCVAP00000013377	EH domain-containing protein. (126 aa)
	LOC107104663	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1679 aa)
	ENSCVAP00000014430	Uncharacterized protein. (114 aa)
	ENSCVAP00000014824	Uncharacterized protein. (230 aa)
	lrrn1	Leucine rich repeat neuronal 1. (715 aa)
	ap2s1	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (142 aa)
	AP1S2	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (167 aa)
	aftph	Aftiphilin a. (734 aa)
	eps15	Epidermal growth factor receptor pathway substrate 15. (1081 aa)
	LOC107103921	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...] (948 aa)
	lrrn3	Leucine rich repeat neuronal 3b. (708 aa)
	LOC107087172	BAI1-associated protein 2-like 2a. (450 aa)
	LOC107095751	Uncharacterized protein. (102 aa)
	LOC107095773	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (151 aa)
	LOC107087306	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (156 aa)
	LOC107082123	Uncharacterized protein. (715 aa)
	LOC107082218	Epsin 1. (644 aa)
	ap2m1	AP-2 complex subunit mu; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but i [...] (442 aa)
	ap1g1	AP-1 complex subunit gamma. (820 aa)
	LOC107100152	Epsin 3a. (601 aa)
	ENSCVAP00000012437	Solute carrier family 18 member 3a. (515 aa)
	ENSCVAP00000012583	Uncharacterized protein. (58 aa)
	LOC107101887	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1677 aa)
	ENSCVAP00000026287	Uncharacterized protein. (456 aa)
	ap1b1	AP complex subunit beta. (985 aa)
	LOC107101473	Alpha_adaptinC2 domain-containing protein. (841 aa)
	epn2	Epsin 2. (579 aa)
	LOC107090293	AP complex subunit beta. (919 aa)
	LOC107082456	Epsin 3b. (601 aa)
	ENSCVAP00000029619	EH domain-containing protein. (82 aa)
	synrg	Synergin, gamma. (1452 aa)
	cltcl1	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1690 aa)
	synj1	Synaptojanin 1. (1582 aa)
	LOC107089997	Solute carrier family 18 member A3. (518 aa)
	LOC107097893	Ig-like domain-containing protein. (791 aa)
	LOC107087706	AP-1 complex subunit gamma. (798 aa)
	baiap2l2	BAI1-associated protein 2-like 2b. (448 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AP1S2	ENSCVAP00000012583	ENSCVAP00000017716	ENSCVAP00000012583	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	Uncharacterized protein.	0.714
AP1S2	ENSCVAP00000014430	ENSCVAP00000017716	ENSCVAP00000014430	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	Uncharacterized protein.	0.658
AP1S2	LOC107087306	ENSCVAP00000017716	ENSCVAP00000001145	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.901
AP1S2	LOC107087706	ENSCVAP00000017716	ENSCVAP00000004960	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	AP-1 complex subunit gamma.	0.976
AP1S2	LOC107090293	ENSCVAP00000017716	ENSCVAP00000028162	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	AP complex subunit beta.	0.809
AP1S2	LOC107095773	ENSCVAP00000017716	ENSCVAP00000001443	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.900
AP1S2	LOC107101887	ENSCVAP00000017716	ENSCVAP00000025415	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.658
AP1S2	LOC107103921	ENSCVAP00000017716	ENSCVAP00000021034	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]	0.698
AP1S2	LOC107104663	ENSCVAP00000017716	ENSCVAP00000014297	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.658
AP1S2	ap1b1	ENSCVAP00000017716	ENSCVAP00000027396	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	AP complex subunit beta.	0.809
AP1S2	ap1g1	ENSCVAP00000017716	ENSCVAP00000022539	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	AP-1 complex subunit gamma.	0.982
AP1S2	ap2m1	ENSCVAP00000017716	ENSCVAP00000031359	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	AP-2 complex subunit mu; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but i [...]	0.529
AP1S2	ap2s1	ENSCVAP00000017716	ENSCVAP00000017307	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.410
AP1S2	cltcl1	ENSCVAP00000017716	ENSCVAP00000030298	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.658
ENSCVAP00000012437	LOC107101473	ENSCVAP00000012437	ENSCVAP00000023523	Solute carrier family 18 member 3a.	Alpha_adaptinC2 domain-containing protein.	0.496
ENSCVAP00000012583	AP1S2	ENSCVAP00000012583	ENSCVAP00000017716	Uncharacterized protein.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.714
ENSCVAP00000012583	ENSCVAP00000013377	ENSCVAP00000012583	ENSCVAP00000013377	Uncharacterized protein.	EH domain-containing protein.	0.639
ENSCVAP00000012583	ENSCVAP00000014430	ENSCVAP00000012583	ENSCVAP00000014430	Uncharacterized protein.	Uncharacterized protein.	0.780
ENSCVAP00000012583	ENSCVAP00000014824	ENSCVAP00000012583	ENSCVAP00000014824	Uncharacterized protein.	Uncharacterized protein.	0.639
ENSCVAP00000012583	ENSCVAP00000026287	ENSCVAP00000012583	ENSCVAP00000026287	Uncharacterized protein.	Uncharacterized protein.	0.639