(41 nodes) Sulfotransferase domain network (Cyprinodon variegatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	chst1	Sulfotransferase; Belongs to the sulfotransferase 1 family. (428 aa)
	LOC107084998	Sulfotransferase; Belongs to the sulfotransferase 1 family. (370 aa)
	ENSCVAP00000000683	Sulfotransferase; Belongs to the sulfotransferase 1 family. (394 aa)
	HS3ST1	Sulfotransferase; Belongs to the sulfotransferase 1 family. (306 aa)
	LOC107102636	Sulfotransferase; Belongs to the sulfotransferase 1 family. (288 aa)
	LOC107097329	Sulfotransferase; Belongs to the sulfotransferase 1 family. (313 aa)
	hs3st6	Sulfotransferase; Belongs to the sulfotransferase 1 family. (373 aa)
	LOC107098445	Sulfotransferase; Belongs to the sulfotransferase 1 family. (362 aa)
	LOC107099703	Sulfotransferase; Belongs to the sulfotransferase 1 family. (364 aa)
	ENSCVAP00000003422	Sulfotransferase; Belongs to the sulfotransferase 1 family. (382 aa)
	LOC107088918	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a. (869 aa)
	LOC107102609	Sulfotransferase; Belongs to the sulfotransferase 1 family. (312 aa)
	LOC107090008	Sulfotransferase; Belongs to the sulfotransferase 1 family. (438 aa)
	DSEL	Dermatan sulfate epimerase like a. (1204 aa)
	LOC107090399	Sulfotransferase; Belongs to the sulfotransferase 1 family. (293 aa)
	LOC107090398	Sulfotransferase; Belongs to the sulfotransferase 1 family. (297 aa)
	LOC107090386	Sulfotransferase; Belongs to the sulfotransferase 1 family. (293 aa)
	LOC107100614	Sulfotransferase; Belongs to the sulfotransferase 1 family. (289 aa)
	chst7	Sulfotransferase; Belongs to the sulfotransferase 1 family. (421 aa)
	LOC107082445	Sulfotransferase; Belongs to the sulfotransferase 1 family. (410 aa)
	LOC107083071	Sulfotransferase; Belongs to the sulfotransferase 1 family. (369 aa)
	LOC107095323	Sulfotransferase; Belongs to the sulfotransferase 1 family. (358 aa)
	LOC107082319	Sulfotransferase; Belongs to the sulfotransferase 1 family. (357 aa)
	LOC107098050	Sulfotransferase; Belongs to the sulfotransferase 1 family. (439 aa)
	LOC107090849	Sulfotransferase; Belongs to the sulfotransferase 1 family. (298 aa)
	sult1a4	Sulfotransferase; Belongs to the sulfotransferase 1 family. (309 aa)
	LOC107083045	Sulfotransferase; Belongs to the sulfotransferase 1 family. (416 aa)
	LOC107085757	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3. (879 aa)
	LOC107098695	Sulfotransferase; Belongs to the sulfotransferase 1 family. (291 aa)
	LOC107091341	Sulfotransferase; Belongs to the sulfotransferase 1 family. (534 aa)
	LOC107082330	Sulfotransferase; Belongs to the sulfotransferase 1 family. (379 aa)
	sult4a1	Sulfotransferase; Belongs to the sulfotransferase 1 family. (284 aa)
	LOC107086228	Sulfotransferase; Belongs to the sulfotransferase 1 family. (374 aa)
	wscd1	WSC domain containing 1b. (573 aa)
	wscd2	WSC domain containing 2. (568 aa)
	Chst2	Sulfotransferase; Belongs to the sulfotransferase 1 family. (456 aa)
	HS3ST5	Sulfotransferase; Belongs to the sulfotransferase 1 family. (345 aa)
	LOC107099704	Sulfotransferase; Belongs to the sulfotransferase 1 family. (381 aa)
	LOC107099698	Sulfotransferase; Belongs to the sulfotransferase 1 family. (399 aa)
	LOC107094997	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1a. (889 aa)
	sult6b1	Sulfotransferase; Belongs to the sulfotransferase 1 family. (269 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DSEL	LOC107091341	ENSCVAP00000006751	ENSCVAP00000030719	Dermatan sulfate epimerase like a.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.403
DSEL	chst1	ENSCVAP00000006751	ENSCVAP00000021918	Dermatan sulfate epimerase like a.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.425
DSEL	chst7	ENSCVAP00000006751	ENSCVAP00000012780	Dermatan sulfate epimerase like a.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.539
HS3ST1	LOC107097329	ENSCVAP00000000737	ENSCVAP00000001150	Sulfotransferase; Belongs to the sulfotransferase 1 family.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.901
HS3ST1	LOC107102609	ENSCVAP00000000737	ENSCVAP00000005674	Sulfotransferase; Belongs to the sulfotransferase 1 family.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.902
LOC107082445	chst1	ENSCVAP00000013203	ENSCVAP00000021918	Sulfotransferase; Belongs to the sulfotransferase 1 family.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.901
LOC107083071	LOC107084998	ENSCVAP00000013607	ENSCVAP00000000528	Sulfotransferase; Belongs to the sulfotransferase 1 family.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.901
LOC107084998	LOC107083071	ENSCVAP00000000528	ENSCVAP00000013607	Sulfotransferase; Belongs to the sulfotransferase 1 family.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.901
LOC107085757	LOC107088918	ENSCVAP00000029954	ENSCVAP00000004524	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3.	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a.	0.901
LOC107085757	LOC107094997	ENSCVAP00000029954	ENSCVAP00000025697	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3.	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1a.	0.901
LOC107088918	LOC107085757	ENSCVAP00000004524	ENSCVAP00000029954	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a.	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3.	0.901
LOC107088918	LOC107094997	ENSCVAP00000004524	ENSCVAP00000025697	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2a.	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1a.	0.901
LOC107090386	LOC107090849	ENSCVAP00000010196	ENSCVAP00000028631	Sulfotransferase; Belongs to the sulfotransferase 1 family.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.511
LOC107090386	LOC107100614	ENSCVAP00000010196	ENSCVAP00000011251	Sulfotransferase; Belongs to the sulfotransferase 1 family.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.520
LOC107090386	LOC107102636	ENSCVAP00000010196	ENSCVAP00000000781	Sulfotransferase; Belongs to the sulfotransferase 1 family.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.511
LOC107090386	sult4a1	ENSCVAP00000010196	ENSCVAP00000018056	Sulfotransferase; Belongs to the sulfotransferase 1 family.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.578
LOC107090386	sult6b1	ENSCVAP00000010196	ENSCVAP00000027064	Sulfotransferase; Belongs to the sulfotransferase 1 family.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.504
LOC107090398	LOC107090849	ENSCVAP00000010176	ENSCVAP00000028631	Sulfotransferase; Belongs to the sulfotransferase 1 family.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.516
LOC107090398	LOC107100614	ENSCVAP00000010176	ENSCVAP00000011251	Sulfotransferase; Belongs to the sulfotransferase 1 family.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.524
LOC107090398	LOC107102636	ENSCVAP00000010176	ENSCVAP00000000781	Sulfotransferase; Belongs to the sulfotransferase 1 family.	Sulfotransferase; Belongs to the sulfotransferase 1 family.	0.513