STRINGSTRING
pfdn5 pfdn5 uri1 uri1 vbp1 vbp1 uxt uxt pfdn2 pfdn2 pfdn4 pfdn4 pfdn6 pfdn6 pfdn1 pfdn1 pdrg1 pdrg1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pfdn5Prefoldin 5. (170 aa)
uri1URI1 prefoldin like chaperone. (491 aa)
vbp1Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family. (195 aa)
uxtUbiquitously-expressed, prefoldin-like chaperone. (146 aa)
pfdn2Prefoldin subunit 2. (162 aa)
pfdn4Prefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit beta family. (136 aa)
pfdn6Prefoldin subunit 6. (126 aa)
pfdn1Prefoldin subunit 1. (122 aa)
pdrg1P53 and DNA-damage regulated 1. (133 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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