(6 nodes) FAM20, C-terminal network (Cyprinodon variegatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107087175	Fam20C domain-containing protein. (425 aa)
	ENSCVAP00000004515	Family with sequence similarity 20 member C, like. (541 aa)
	fam20a	FAM20A golgi associated secretory pathway pseudokinase. (536 aa)
	LOC107086263	Fam20C domain-containing protein. (552 aa)
	LOC107092808	FAM20C golgi associated secretory pathway kinase a. (565 aa)
	fam20b	FAM20B glycosaminoglycan xylosylkinase. (409 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCVAP00000004515	LOC107087175	ENSCVAP00000004515	ENSCVAP00000002161	Family with sequence similarity 20 member C, like.	Fam20C domain-containing protein.	0.778
ENSCVAP00000004515	fam20a	ENSCVAP00000004515	ENSCVAP00000017669	Family with sequence similarity 20 member C, like.	FAM20A golgi associated secretory pathway pseudokinase.	0.784
ENSCVAP00000004515	fam20b	ENSCVAP00000004515	ENSCVAP00000017894	Family with sequence similarity 20 member C, like.	FAM20B glycosaminoglycan xylosylkinase.	0.702
LOC107086263	LOC107087175	ENSCVAP00000031911	ENSCVAP00000002161	Fam20C domain-containing protein.	Fam20C domain-containing protein.	0.780
LOC107086263	fam20a	ENSCVAP00000031911	ENSCVAP00000017669	Fam20C domain-containing protein.	FAM20A golgi associated secretory pathway pseudokinase.	0.926
LOC107086263	fam20b	ENSCVAP00000031911	ENSCVAP00000017894	Fam20C domain-containing protein.	FAM20B glycosaminoglycan xylosylkinase.	0.695
LOC107087175	ENSCVAP00000004515	ENSCVAP00000002161	ENSCVAP00000004515	Fam20C domain-containing protein.	Family with sequence similarity 20 member C, like.	0.778
LOC107087175	LOC107086263	ENSCVAP00000002161	ENSCVAP00000031911	Fam20C domain-containing protein.	Fam20C domain-containing protein.	0.780
LOC107087175	LOC107092808	ENSCVAP00000002161	ENSCVAP00000001593	Fam20C domain-containing protein.	FAM20C golgi associated secretory pathway kinase a.	0.779
LOC107092808	LOC107087175	ENSCVAP00000001593	ENSCVAP00000002161	FAM20C golgi associated secretory pathway kinase a.	Fam20C domain-containing protein.	0.779
LOC107092808	fam20a	ENSCVAP00000001593	ENSCVAP00000017669	FAM20C golgi associated secretory pathway kinase a.	FAM20A golgi associated secretory pathway pseudokinase.	0.926
LOC107092808	fam20b	ENSCVAP00000001593	ENSCVAP00000017894	FAM20C golgi associated secretory pathway kinase a.	FAM20B glycosaminoglycan xylosylkinase.	0.695
fam20a	ENSCVAP00000004515	ENSCVAP00000017669	ENSCVAP00000004515	FAM20A golgi associated secretory pathway pseudokinase.	Family with sequence similarity 20 member C, like.	0.784
fam20a	LOC107086263	ENSCVAP00000017669	ENSCVAP00000031911	FAM20A golgi associated secretory pathway pseudokinase.	Fam20C domain-containing protein.	0.926
fam20a	LOC107092808	ENSCVAP00000017669	ENSCVAP00000001593	FAM20A golgi associated secretory pathway pseudokinase.	FAM20C golgi associated secretory pathway kinase a.	0.926
fam20b	ENSCVAP00000004515	ENSCVAP00000017894	ENSCVAP00000004515	FAM20B glycosaminoglycan xylosylkinase.	Family with sequence similarity 20 member C, like.	0.702
fam20b	LOC107086263	ENSCVAP00000017894	ENSCVAP00000031911	FAM20B glycosaminoglycan xylosylkinase.	Fam20C domain-containing protein.	0.695
fam20b	LOC107092808	ENSCVAP00000017894	ENSCVAP00000001593	FAM20B glycosaminoglycan xylosylkinase.	FAM20C golgi associated secretory pathway kinase a.	0.695