(63 nodes) Ubiquitin-conjugating enzyme/RWD-like network (Cyprinodon variegatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	aktip	Akt interacting protein. (294 aa)
	LOC107099906	Si:dkey-24l11.2. (658 aa)
	fancl	FA complementation group L. (371 aa)
	ube2g1	Ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast). (89 aa)
	EIF2AK4	Eukaryotic translation initiation factor 2 alpha kinase 4. (1654 aa)
	LOC107082391	Ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
	ube2f	Ubiquitin-conjugating enzyme E2F (putative); Belongs to the ubiquitin-conjugating enzyme family. (191 aa)
	ube2i	Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	rwdd2b	RWD domain containing 2B. (331 aa)
	ube2w	UBIQUITIN_CONJUGAT_2 domain-containing protein. (151 aa)
	LOC107088242	Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
	LOC107096594	RBR-type E3 ubiquitin transferase. (504 aa)
	ube2m	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (185 aa)
	ube2j2	Ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast). (261 aa)
	LOC107100940	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (194 aa)
	LOC107085413	UEV domain-containing protein. (469 aa)
	tsg101	Tumor susceptibility 101a. (390 aa)
	ENSCVAP00000006705	UBIQUITIN_CONJUGAT_2 domain-containing protein. (142 aa)
	LOC107083810	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
	LOC107104417	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (183 aa)
	rwdd4	RWD domain containing 4. (184 aa)
	LOC107094607	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (153 aa)
	ube2z	Ubiquitin-conjugating enzyme E2Z. (363 aa)
	ENSCVAP00000024543	Zgc:123278. (186 aa)
	ENSCVAP00000024292	Uncharacterized protein. (108 aa)
	ube2s	Ubiquitin-conjugating enzyme E2S; Belongs to the ubiquitin-conjugating enzyme family. (234 aa)
	LOC107099084	Ubiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
	LOC107096805	Ubiquitin-conjugating enzyme E2D 3; Belongs to the ubiquitin-conjugating enzyme family. (148 aa)
	LOC107103559	Ubiquitin-conjugating enzyme E2Nb; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
	LOC107103191	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (238 aa)
	rnf14	RBR-type E3 ubiquitin transferase. (446 aa)
	ube2a	Ubiquitin-conjugating enzyme E2A (RAD6 homolog); Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
	UBE2O	Ubiquitin conjugating enzyme E2 O. (668 aa)
	LOC107087199	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	LOC107097321	Cell division cycle 34 homolog (S. cerevisiae) a; Belongs to the ubiquitin-conjugating enzyme family. (241 aa)
	LOC107101750	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (209 aa)
	LOC107081669	Uncharacterized protein. (1065 aa)
	impact	Impact RWD domain protein. (317 aa)
	LOC107101209	Ubiquitin-conjugating enzyme E2T (putative). (194 aa)
	LOC107104226	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (169 aa)
	UBE2D1	Ubiquitin-conjugating enzyme E2D 1a; Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
	ube2ql1	Ubiquitin-conjugating enzyme E2Q family-like 1. (278 aa)
	ube2j1	Ubiquitin-conjugating enzyme E2, J1. (311 aa)
	LOC107100937	Ubiquitin-conjugating enzyme E2E 2; Belongs to the ubiquitin-conjugating enzyme family. (201 aa)
	ube2b	Ubiquitin-conjugating enzyme E2B (RAD6 homolog); Belongs to the ubiquitin-conjugating enzyme family. (162 aa)
	Ufc1	Ubiquitin-fold modifier conjugating enzyme 1. (96 aa)
	ENSCVAP00000031935	Uncharacterized protein. (62 aa)
	vps37a	VPS37A subunit of ESCRT-I. (375 aa)
	LOC107090723	Ubiquitin-conjugating enzyme E2 variant 1. (147 aa)
	LOC107082307	Ubiquitin-conjugating enzyme E2D 4 (putative); Belongs to the ubiquitin-conjugating enzyme family. (147 aa)
	LOC107095437	Ubiquitin-conjugating enzyme E2Q family member 1. (373 aa)
	ube2r2	Ubiquitin-conjugating enzyme E2R 2; Belongs to the ubiquitin-conjugating enzyme family. (262 aa)
	LOC107088009	Ubiquitin-conjugating enzyme E2L 3b; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
	LOC107096489	Ubiquitin conjugating enzyme E2 A, like; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
	ENSCVAP00000029008	Ubiquitin-conjugating enzyme E2 variant 2. (145 aa)
	ENSCVAP00000028034	UBIQUITIN_CONJUGAT_2 domain-containing protein. (122 aa)
	rwdd1	RWD domain containing 1. (240 aa)
	ube2c	Ubiquitin-conjugating enzyme E2C; Belongs to the ubiquitin-conjugating enzyme family. (174 aa)
	Birc6	UBIQUITIN_CONJUGAT_2 domain-containing protein. (149 aa)
	ENSCVAP00000026994	Uncharacterized protein. (472 aa)
	dhx57	DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57. (1419 aa)
	ube2h	Ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. (183 aa)
	ube2g2	Ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family. (165 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Birc6	ENSCVAP00000006705	ENSCVAP00000027511	ENSCVAP00000006705	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.444
Birc6	ENSCVAP00000024292	ENSCVAP00000027511	ENSCVAP00000024292	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.444
Birc6	ENSCVAP00000026994	ENSCVAP00000027511	ENSCVAP00000026994	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.631
Birc6	ENSCVAP00000028034	ENSCVAP00000027511	ENSCVAP00000028034	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.754
Birc6	ENSCVAP00000029008	ENSCVAP00000027511	ENSCVAP00000029008	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubiquitin-conjugating enzyme E2 variant 2.	0.980
Birc6	ENSCVAP00000031935	ENSCVAP00000027511	ENSCVAP00000031935	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.980
Birc6	LOC107081669	ENSCVAP00000027511	ENSCVAP00000020216	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.754
Birc6	LOC107082307	ENSCVAP00000027511	ENSCVAP00000031480	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubiquitin-conjugating enzyme E2D 4 (putative); Belongs to the ubiquitin-conjugating enzyme family.	0.754
Birc6	LOC107082391	ENSCVAP00000027511	ENSCVAP00000016384	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family.	0.754
Birc6	LOC107083810	ENSCVAP00000027511	ENSCVAP00000006204	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.754
Birc6	LOC107085413	ENSCVAP00000027511	ENSCVAP00000024715	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UEV domain-containing protein.	0.412
Birc6	LOC107088009	ENSCVAP00000027511	ENSCVAP00000029459	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubiquitin-conjugating enzyme E2L 3b; Belongs to the ubiquitin-conjugating enzyme family.	0.743
Birc6	LOC107088242	ENSCVAP00000027511	ENSCVAP00000009671	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family.	0.573
Birc6	LOC107090723	ENSCVAP00000027511	ENSCVAP00000031618	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubiquitin-conjugating enzyme E2 variant 1.	0.994
Birc6	LOC107094607	ENSCVAP00000027511	ENSCVAP00000001617	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.754
Birc6	LOC107095437	ENSCVAP00000027511	ENSCVAP00000030544	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubiquitin-conjugating enzyme E2Q family member 1.	0.444
Birc6	LOC107096489	ENSCVAP00000027511	ENSCVAP00000029256	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubiquitin conjugating enzyme E2 A, like; Belongs to the ubiquitin-conjugating enzyme family.	0.618
Birc6	LOC107096805	ENSCVAP00000027511	ENSCVAP00000023239	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubiquitin-conjugating enzyme E2D 3; Belongs to the ubiquitin-conjugating enzyme family.	0.754
Birc6	LOC107097321	ENSCVAP00000027511	ENSCVAP00000020636	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Cell division cycle 34 homolog (S. cerevisiae) a; Belongs to the ubiquitin-conjugating enzyme family.	0.612
Birc6	LOC107099084	ENSCVAP00000027511	ENSCVAP00000023618	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family.	0.573