STRINGSTRING
LOC107082631 LOC107082631 thoc3 thoc3 eml5 eml5 pak1ip1 pak1ip1 LOC107083660 LOC107083660 nedd1 nedd1 LOC107086240 LOC107086240 FZR1 FZR1 gemin5 gemin5 SMU1 SMU1 wdr43 wdr43 anapc4 anapc4 LOC107090938 LOC107090938 LOC107101852 LOC107101852 LOC107103115 LOC107103115 EML6 EML6 LOC107098333 LOC107098333 cdc20 cdc20 wdr35 wdr35 aamp aamp
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107082631Fizzy/cell division cycle 20 related 1b. (503 aa)
thoc3THO complex 3. (322 aa)
eml5EMAP like 5. (1957 aa)
pak1ip1PAK1 interacting protein 1. (362 aa)
LOC107083660Uncharacterized protein. (884 aa)
nedd1NEDD1 gamma-tubulin ring complex targeting factor. (663 aa)
LOC107086240WD_REPEATS_REGION domain-containing protein. (480 aa)
FZR1Fizzy/cell division cycle 20 related 1a. (497 aa)
gemin5Gem (nuclear organelle) associated protein 5. (1463 aa)
SMU1SMU1 DNA replication regulator and spliceosomal factor. (513 aa)
wdr43WD repeat domain 43. (540 aa)
anapc4Anaphase promoting complex subunit 4. (741 aa)
LOC107090938Uncharacterized protein. (1853 aa)
LOC107101852Coronin; Belongs to the WD repeat coronin family. (501 aa)
LOC107103115WD_REPEATS_REGION domain-containing protein. (315 aa)
EML6EMAP like 6. (1659 aa)
LOC107098333TUB like protein 4b; Belongs to the TUB family. (1806 aa)
cdc20Cell division cycle 20 homolog. (499 aa)
wdr35WD repeat-containing protein 35. (1157 aa)
aampAngio-associated, migratory cell protein. (416 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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