STRINGSTRING
LOC107088057 LOC107088057 LOC107099463 LOC107099463 otud4 otud4 LOC107096503 LOC107096503 LOC107096509 LOC107096509 LOC107083097 LOC107083097 USP34 USP34 LOC107098761 LOC107098761 uchl5 uchl5 Ufsp1 Ufsp1 LOC107102261 LOC107102261 LOC107102257 LOC107102257 atg4b atg4b ctsc ctsc Usp42 Usp42 usp47 usp47 LOC107086772 LOC107086772 LOC107086845 LOC107086845 ENSCVAP00000016239 ENSCVAP00000016239 LOC107104575 LOC107104575 LOC107104576 LOC107104576 capn7 capn7 ENSCVAP00000017002 ENSCVAP00000017002 cyld cyld usp14 usp14 LOC107088494 LOC107088494 ctsw ctsw LOC107086239 LOC107086239 usp25 usp25 usp45 usp45 ENSCVAP00000018236 ENSCVAP00000018236 LOC107088490 LOC107088490 usp7 usp7 usp39 usp39 usp9x usp9x usp10 usp10 LOC107093500 LOC107093500 capn15 capn15 otud3 otud3 otud1 otud1 usp40 usp40 LOC107103873 LOC107103873 OTUB2 OTUB2 usp4 usp4 LOC107093312 LOC107093312 LOC107096318 LOC107096318 tgm2 tgm2 CTSO CTSO usp32 usp32 atg4d atg4d USP15 USP15 usp38 usp38 tgm1 tgm1 LOC107081877 LOC107081877 ctso ctso LOC107104837 LOC107104837 ky ky usp46 usp46 senp8 senp8 capn10 capn10 usp1 usp1 LOC107088362 LOC107088362 capn3 capn3 LOC107096091 LOC107096091 ENSCVAP00000005107 ENSCVAP00000005107 LOC107082650 LOC107082650 CAPN2 CAPN2 ENSCVAP00000005692 ENSCVAP00000005692 LOC107101457 LOC107101457 LOC107093158 LOC107093158 TINAGL1 TINAGL1 usp2 usp2 otub1 otub1 LOC107104721 LOC107104721 CTSZ CTSZ ngly1 ngly1 LOC107087041 LOC107087041 LOC107093889 LOC107093889 LOC107084843 LOC107084843 pan2 pan2 LOC107092135 LOC107092135 LOC107083184 LOC107083184 LOC107085968 LOC107085968 ENSCVAP00000009496 ENSCVAP00000009496 USP50 USP50 usp36 usp36 ENSCVAP00000009917 ENSCVAP00000009917 LOC107092195 LOC107092195 atg4c atg4c LOC107091510 LOC107091510 LOC107089173 LOC107089173 otud5 otud5 LOC107092631 LOC107092631 LOC107094339 LOC107094339 xpc xpc ctsl ctsl LOC107095424 LOC107095424 LOC107090321 LOC107090321 blmh blmh senp7 senp7 ctsh ctsh LOC107103451 LOC107103451 bap1 bap1 ENSCVAP00000030967 ENSCVAP00000030967 uchl3 uchl3 ctsb ctsb ENSCVAP00000032376 ENSCVAP00000032376 usp37 usp37 usp30 usp30 usp5 usp5 usp49 usp49 LOC107096173 LOC107096173 LOC107088360 LOC107088360 LOC107087755 LOC107087755 LOC107087727 LOC107087727 LOC107087654 LOC107087654 ENSCVAP00000023564 ENSCVAP00000023564 LOC107101970 LOC107101970 ENSCVAP00000023592 ENSCVAP00000023592 LOC107082647 LOC107082647 usp13 usp13 ENSCVAP00000024056 ENSCVAP00000024056 usp12 usp12 cep76 cep76 otud6b otud6b capn5 capn5 uchl1 uchl1 ENSCVAP00000024906 ENSCVAP00000024906 ENSCVAP00000024911 ENSCVAP00000024911 ENSCVAP00000025339 ENSCVAP00000025339 ENSCVAP00000025774 ENSCVAP00000025774 usp43 usp43 usp8 usp8 LOC107080941 LOC107080941 LOC107099482 LOC107099482 uspl1 uspl1 f13a1 f13a1 usp33 usp33 ENSCVAP00000027945 ENSCVAP00000027945 usp3 usp3 LOC107098210 LOC107098210 usp44 usp44 LOC107091977 LOC107091977 usp20 usp20 LOC107096502 LOC107096502 yod1 yod1 LOC107102256 LOC107102256 LOC107100520 LOC107100520
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107088057Cathepsin L.1; Belongs to the peptidase C1 family. (334 aa)
LOC107099463Cathepsin 12; Belongs to the peptidase C1 family. (353 aa)
otud4OTU domain-containing protein. (880 aa)
LOC107096503Uncharacterized protein; Belongs to the peptidase C1 family. (335 aa)
LOC107096509Uncharacterized protein; Belongs to the peptidase C1 family. (337 aa)
LOC107083097Ubiquitin specific peptidase 31; Belongs to the peptidase C19 family. (1283 aa)
USP34Ubiquitin specific peptidase 34; Belongs to the peptidase C19 family. (3434 aa)
LOC107098761TGc domain-containing protein. (701 aa)
uchl5Ubiquitin carboxyl-terminal hydrolase. (329 aa)
Ufsp1UFM1-specific peptidase 1 (non-functional). (246 aa)
LOC107102261Calpain 1, (mu/I) large subunit a; Belongs to the peptidase C2 family. (704 aa)
LOC107102257Uncharacterized protein; Belongs to the peptidase C2 family. (683 aa)
atg4bCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (422 aa)
ctscCathepsin C; Belongs to the peptidase C1 family. (455 aa)
Usp42UCH domain-containing protein. (240 aa)
usp47Ubiquitin specific peptidase 47; Belongs to the peptidase C19 family. (1354 aa)
LOC107086772Cathepsin S, ortholog2, tandem duplicate 1; Belongs to the peptidase C1 family. (337 aa)
LOC107086845Cathepsin K; Belongs to the peptidase C1 family. (334 aa)
ENSCVAP00000016239SUMO specific peptidase 3b. (220 aa)
LOC107104575TGc domain-containing protein. (682 aa)
LOC107104576TGc domain-containing protein. (434 aa)
capn7Calpain 7; Belongs to the peptidase C2 family. (684 aa)
ENSCVAP00000017002USP domain-containing protein. (212 aa)
cyldCylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family. (949 aa)
usp14Ubiquitin carboxyl-terminal hydrolase. (500 aa)
LOC107088494Si:dkey-78a14.4; Belongs to the arylamine N-acetyltransferase family. (297 aa)
ctswCathepsin F; Belongs to the peptidase C1 family. (471 aa)
LOC107086239Uncharacterized protein; Belongs to the peptidase C2 family. (693 aa)
usp25Ubiquitin specific peptidase 25; Belongs to the peptidase C19 family. (1184 aa)
usp45Ubiquitin carboxyl-terminal hydrolase. (805 aa)
ENSCVAP00000018236Ubiquitin specific peptidase 54b. (266 aa)
LOC107088490Transglutaminase 2b. (678 aa)
usp7Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family. (1182 aa)
usp39Ubiquitin specific peptidase 39. (498 aa)
usp9xUbiquitin specific peptidase 9; Belongs to the peptidase C19 family. (2268 aa)
usp10Ubiquitin carboxyl-terminal hydrolase. (877 aa)
LOC107093500Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (642 aa)
capn15Calpain 15; Belongs to the peptidase C2 family. (1208 aa)
otud3OTU deubiquitinase 3. (358 aa)
otud1OTU deubiquitinase 1. (366 aa)
usp40Ubiquitin specific peptidase 40; Belongs to the peptidase C19 family. (1240 aa)
LOC107103873Zgc:55262; Belongs to the peptidase C2 family. (706 aa)
OTUB2OTU deubiquitinase, ubiquitin aldehyde binding 2. (238 aa)
usp4Ubiquitin specific peptidase 4 (proto-oncogene); Belongs to the peptidase C19 family. (1044 aa)
LOC107093312Cylindromatosis (turban tumor syndrome), like. (459 aa)
LOC107096318Zgc:103438; Belongs to the peptidase C1 family. (551 aa)
tgm2TGc domain-containing protein. (701 aa)
CTSOCathepsin O; Belongs to the peptidase C1 family. (327 aa)
usp32Ubiquitin specific peptidase 32; Belongs to the peptidase C19 family. (1586 aa)
atg4dCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (497 aa)
USP15Ubiquitin specific peptidase 15; Belongs to the peptidase C19 family. (1037 aa)
usp38Ubiquitin specific peptidase 38; Belongs to the peptidase C19 family. (1031 aa)
tgm1Transglutaminase 1 like 3. (782 aa)
LOC107081877Calpain 12; Belongs to the peptidase C2 family. (721 aa)
ctsoCathepsin O; Belongs to the peptidase C1 family. (309 aa)
LOC107104837ULP_PROTEASE domain-containing protein. (657 aa)
kyKyphoscoliosis peptidase. (864 aa)
usp46Ubiquitin specific peptidase 46; Belongs to the peptidase C19 family. (366 aa)
senp8SUMO peptidase family member, NEDD8 specific. (218 aa)
capn10Calpain 10; Belongs to the peptidase C2 family. (662 aa)
usp1Ubiquitin carboxyl-terminal hydrolase. (808 aa)
LOC107088362Cathepsin S, ortholog 1; Belongs to the peptidase C1 family. (331 aa)
capn3Calpain 3a, (p94); Belongs to the peptidase C2 family. (713 aa)
LOC107096091Si:rp71-1f1.4; Belongs to the arylamine N-acetyltransferase family. (282 aa)
ENSCVAP00000005107SUMO specific peptidase 6a. (356 aa)
LOC107082650ALG13 UDP-N-acetylglucosaminyltransferase subunit. (656 aa)
CAPN2Calpain 2, (m/II) large subunit, like; Belongs to the peptidase C2 family. (701 aa)
ENSCVAP00000005692Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (101 aa)
LOC107101457USP domain-containing protein; Belongs to the peptidase C19 family. (548 aa)
LOC107093158Calpain 3b; Belongs to the peptidase C2 family. (739 aa)
TINAGL1Tubulointerstitial nephritis antigen like 1; Belongs to the peptidase C1 family. (470 aa)
usp2Ubiquitin carboxyl-terminal hydrolase. (396 aa)
otub1Ubiquitin thioesterase. (266 aa)
LOC107104721Ubiquitin specific peptidase 54a. (1482 aa)
CTSZCathepsin Z; Belongs to the peptidase C1 family. (297 aa)
ngly1N-glycanase 1. (564 aa)
LOC107087041Ubiquitin specific peptidase 21; Belongs to the peptidase C19 family. (364 aa)
LOC107093889Cylindromatosis (turban tumor syndrome), b. (733 aa)
LOC107084843Uncharacterized protein; Belongs to the peptidase C2 family. (691 aa)
pan2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] (1210 aa)
LOC107092135Cathepsin Ba; Belongs to the peptidase C1 family. (335 aa)
LOC107083184Ubiquitin carboxyl-terminal hydrolase. (522 aa)
LOC107085968ULP_PROTEASE domain-containing protein. (758 aa)
ENSCVAP00000009496Ubiquitin specific peptidase 53b. (343 aa)
USP50Ubiquitin specific peptidase 50; Belongs to the peptidase C19 family. (345 aa)
usp36Ubiquitin specific peptidase 36; Belongs to the peptidase C19 family. (1105 aa)
ENSCVAP00000009917TGc domain-containing protein. (612 aa)
LOC107092195Si:dkey-21c19.3. (723 aa)
atg4cCysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (475 aa)
LOC107091510Ubiquitin carboxyl-terminal hydrolase. (380 aa)
LOC107089173Cathepsin Z; Belongs to the peptidase C1 family. (313 aa)
otud5OTU deubiquitinase 5a. (539 aa)
LOC107092631Transglutaminase 2, like. (692 aa)
LOC107094339USP domain-containing protein; Belongs to the peptidase C19 family. (342 aa)
xpcXeroderma pigmentosum, complementation group C. (903 aa)
ctslUncharacterized protein; Belongs to the peptidase C1 family. (337 aa)
LOC107095424Pept_C1 domain-containing protein; Belongs to the peptidase C1 family. (308 aa)
LOC107090321Ubiquitin carboxyl-terminal hydrolase. (506 aa)
blmhBleomycin hydrolase; Belongs to the peptidase C1 family. (415 aa)
senp7ULP_PROTEASE domain-containing protein. (1073 aa)
ctshCathepsin H; Belongs to the peptidase C1 family. (325 aa)
LOC107103451Transglutaminase 5, like. (660 aa)
bap1Ubiquitin carboxyl-terminal hydrolase. (724 aa)
ENSCVAP00000030967Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (557 aa)
uchl3Ubiquitin carboxyl-terminal hydrolase. (228 aa)
ctsbCathepsin Bb; Belongs to the peptidase C1 family. (337 aa)
ENSCVAP00000032376USP domain-containing protein; Belongs to the peptidase C19 family. (198 aa)
usp37Ubiquitin carboxyl-terminal hydrolase. (953 aa)
usp30Ubiquitin carboxyl-terminal hydrolase. (509 aa)
usp5Ubiquitin carboxyl-terminal hydrolase. (829 aa)
usp49Ubiquitin carboxyl-terminal hydrolase. (668 aa)
LOC107096173SUMO specific peptidase 2. (615 aa)
LOC107088360Uncharacterized protein; Belongs to the peptidase C1 family. (339 aa)
LOC107087755Si:dkey-19b23.13; Belongs to the peptidase C2 family. (712 aa)
LOC107087727Transglutaminase 1 like 1. (786 aa)
LOC107087654Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family. (463 aa)
ENSCVAP00000023564Ubiquitin specific peptidase 28; Belongs to the peptidase C19 family. (715 aa)
LOC107101970TGc domain-containing protein. (506 aa)
ENSCVAP00000023592Uncharacterized protein. (173 aa)
LOC107082647Calpain 2, (m/II) large subunit b; Belongs to the peptidase C2 family. (659 aa)
usp13Ubiquitin carboxyl-terminal hydrolase. (863 aa)
ENSCVAP00000024056Uncharacterized protein. (180 aa)
usp12Ubiquitin specific peptidase 12a; Belongs to the peptidase C19 family. (372 aa)
cep76Centrosomal protein 76. (662 aa)
otud6bOTU domain containing 6B. (297 aa)
capn5Calpain 5a; Belongs to the peptidase C2 family. (637 aa)
uchl1Ubiquitin carboxyl-terminal hydrolase. (204 aa)
ENSCVAP00000024906USP domain-containing protein; Belongs to the peptidase C19 family. (109 aa)
ENSCVAP00000024911USP domain-containing protein. (422 aa)
ENSCVAP00000025339Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (470 aa)
ENSCVAP00000025774USP domain-containing protein; Belongs to the peptidase C19 family. (228 aa)
usp43Ubiquitin specific peptidase 43b; Belongs to the peptidase C19 family. (1207 aa)
usp8Ubiquitin specific peptidase 8; Belongs to the peptidase C19 family. (1010 aa)
LOC107080941Cathepsin L.1; Belongs to the peptidase C1 family. (334 aa)
LOC107099482Si:dkey-26g8.5; Belongs to the peptidase C1 family. (336 aa)
uspl1Ubiquitin specific peptidase like 1. (1050 aa)
f13a1Coagulation factor XIII, A1 polypeptide b. (742 aa)
usp33Ubiquitin carboxyl-terminal hydrolase. (915 aa)
ENSCVAP00000027945Ubiquitin specific peptidase 48. (413 aa)
usp3Ubiquitin carboxyl-terminal hydrolase. (661 aa)
LOC107098210Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (588 aa)
usp44Ubiquitin carboxyl-terminal hydrolase. (745 aa)
LOC107091977Uncharacterized protein. (967 aa)
usp20Ubiquitin carboxyl-terminal hydrolase. (887 aa)
LOC107096502Uncharacterized protein; Belongs to the peptidase C1 family. (335 aa)
yod1YOD1 deubiquitinase. (300 aa)
LOC107102256Uncharacterized protein; Belongs to the peptidase C2 family. (712 aa)
LOC107100520USP domain-containing protein. (1031 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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