39 items (Cyprinodon variegatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107096289	Fibronectin type-III domain-containing protein. (607 aa)
	dusp6	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (384 aa)
	LOC107082582	Si:dkey-175m17.7. (879 aa)
	ssh3	Si:ch211-203d1.3. (599 aa)
	LOC107097639	Slingshot protein phosphatase 2b. (1166 aa)
	pea15	Proliferation and apoptosis adaptor protein 15. (130 aa)
	LOC107092021	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (367 aa)
	LOC107101186	Mitogen-activated protein kinase. (379 aa)
	LOC107085172	Tyrosine-protein kinase. (1057 aa)
	dusp19	Dual specificity phosphatase 19a. (211 aa)
	map2k2	Mitogen-activated protein kinase kinase 2a; Belongs to the protein kinase superfamily. (399 aa)
	mapk1	Mitogen-activated protein kinase. (351 aa)
	LOC107084561	Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (210 aa)
	LOC107084082	Dual specificity phosphatase 22a; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (191 aa)
	dusp16	Dual specificity phosphatase 16. (617 aa)
	cdk1	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily. (301 aa)
	LOC107091255	Slingshot protein phosphatase 1b. (644 aa)
	ssh1	Slingshot protein phosphatase 1a. (1025 aa)
	dusp1	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (376 aa)
	LOC107090013	Dual specificity phosphatase 22b. (191 aa)
	dusp10	Dual specificity phosphatase 10; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (472 aa)
	jak2	Tyrosine-protein kinase. (1131 aa)
	LOC107088171	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (393 aa)
	ssh2	Slingshot protein phosphatase 2a. (1092 aa)
	LOC107103198	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (384 aa)
	dusp12	Dual specificity phosphatase 12. (303 aa)
	LOC107083006	Uncharacterized protein; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (198 aa)
	dusp28	Dual specificity phosphatase 28. (149 aa)
	dusp5	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (376 aa)
	jak1	Tyrosine-protein kinase. (1205 aa)
	map2k1	Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily. (395 aa)
	ENSCVAP00000004629	Uncharacterized protein. (195 aa)
	LOC107091061	Uncharacterized protein. (397 aa)
	dusp22	Uncharacterized protein. (95 aa)
	styx	Serine/threonine/tyrosine interacting protein. (218 aa)
	LOC107094527	Dual specificity phosphatase 2. (314 aa)
	mob2	MOB kinase activator 2a. (253 aa)
	dusp8	Dual specificity phosphatase 8a. (679 aa)
	LOC107096283	Dual specificity phosphatase 19b. (203 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107082582	LOC107101186	ENSCVAP00000007748	ENSCVAP00000013006	Si:dkey-175m17.7.	Mitogen-activated protein kinase.	0.583
LOC107082582	mapk1	ENSCVAP00000007748	ENSCVAP00000015363	Si:dkey-175m17.7.	Mitogen-activated protein kinase.	0.583
LOC107085172	LOC107096289	ENSCVAP00000013616	ENSCVAP00000000990	Tyrosine-protein kinase.	Fibronectin type-III domain-containing protein.	0.467
LOC107085172	map2k1	ENSCVAP00000013616	ENSCVAP00000004697	Tyrosine-protein kinase.	Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.	0.423
LOC107085172	map2k2	ENSCVAP00000013616	ENSCVAP00000014852	Tyrosine-protein kinase.	Mitogen-activated protein kinase kinase 2a; Belongs to the protein kinase superfamily.	0.423
LOC107088171	LOC107101186	ENSCVAP00000026780	ENSCVAP00000013006	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Mitogen-activated protein kinase.	0.911
LOC107088171	mapk1	ENSCVAP00000026780	ENSCVAP00000015363	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Mitogen-activated protein kinase.	0.911
LOC107092021	LOC107101186	ENSCVAP00000012307	ENSCVAP00000013006	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Mitogen-activated protein kinase.	0.805
LOC107092021	mapk1	ENSCVAP00000012307	ENSCVAP00000015363	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	Mitogen-activated protein kinase.	0.805
LOC107094527	LOC107101186	ENSCVAP00000002994	ENSCVAP00000013006	Dual specificity phosphatase 2.	Mitogen-activated protein kinase.	0.805
LOC107094527	mapk1	ENSCVAP00000002994	ENSCVAP00000015363	Dual specificity phosphatase 2.	Mitogen-activated protein kinase.	0.805
LOC107096289	LOC107085172	ENSCVAP00000000990	ENSCVAP00000013616	Fibronectin type-III domain-containing protein.	Tyrosine-protein kinase.	0.467
LOC107096289	jak1	ENSCVAP00000000990	ENSCVAP00000020989	Fibronectin type-III domain-containing protein.	Tyrosine-protein kinase.	0.507
LOC107096289	jak2	ENSCVAP00000000990	ENSCVAP00000026589	Fibronectin type-III domain-containing protein.	Tyrosine-protein kinase.	0.467
LOC107101186	LOC107082582	ENSCVAP00000013006	ENSCVAP00000007748	Mitogen-activated protein kinase.	Si:dkey-175m17.7.	0.583
LOC107101186	LOC107088171	ENSCVAP00000013006	ENSCVAP00000026780	Mitogen-activated protein kinase.	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.911
LOC107101186	LOC107092021	ENSCVAP00000013006	ENSCVAP00000012307	Mitogen-activated protein kinase.	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.805
LOC107101186	LOC107094527	ENSCVAP00000013006	ENSCVAP00000002994	Mitogen-activated protein kinase.	Dual specificity phosphatase 2.	0.805
LOC107101186	LOC107103198	ENSCVAP00000013006	ENSCVAP00000028518	Mitogen-activated protein kinase.	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.911
LOC107101186	dusp1	ENSCVAP00000013006	ENSCVAP00000019904	Mitogen-activated protein kinase.	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.	0.805