42 items (Cyprinodon variegatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107101278	Mitogen-activated protein kinase 12b. (331 aa)
	ENSCVAP00000011893	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (305 aa)
	birc7	Baculoviral IAP repeat containing 7. (399 aa)
	traf6	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (572 aa)
	LOC107090247	Mitogen-activated protein kinase kinase 6. (358 aa)
	LOC107088576	Mitogen-activated protein kinase. (364 aa)
	LOC107086824	Uncharacterized protein; Belongs to the peptidase C14A family. (477 aa)
	cyld	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family. (949 aa)
	nod1	Nucleotide-binding oligomerization domain containing 1. (921 aa)
	tab2	TGF-beta activated kinase 1 (MAP3K7) binding protein 2. (752 aa)
	tab1	TGF-beta activated kinase 1/MAP3K7 binding protein 1. (506 aa)
	MAP2K6	Mitogen-activated protein kinase kinase 6. (335 aa)
	LOC107087504	Mitogen-activated protein kinase. (357 aa)
	LOC107093789	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. (580 aa)
	LOC107101279	Mitogen-activated protein kinase 11. (293 aa)
	birc2	Baculoviral IAP repeat containing 2. (615 aa)
	LOC107103559	Ubiquitin-conjugating enzyme E2Nb; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	casp9	Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. (430 aa)
	LOC107091977	Uncharacterized protein. (967 aa)
	LOC107082492	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (361 aa)
	LOC107098764	E3 ubiquitin-protein ligase. (806 aa)
	LOC107098762	E3 ubiquitin-protein ligase. (725 aa)
	LOC107103455	E3 ubiquitin-protein ligase. (866 aa)
	RIPK2	Receptor interacting serine/threonine kinase 2. (460 aa)
	LOC107085741	Sterile alpha motif and leucine zipper containing kinase AZK. (793 aa)
	LOC107097523	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (484 aa)
	map3k20	Protein kinase domain-containing protein. (698 aa)
	tab3	TGF-beta activated kinase 1 (MAP3K7) binding protein 3. (598 aa)
	LOC107090723	Ubiquitin-conjugating enzyme E2 variant 1. (147 aa)
	LOC107093312	Cylindromatosis (turban tumor syndrome), like. (459 aa)
	casp2	Caspase 2, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. (460 aa)
	LOC107086723	Mitogen-activated protein kinase. (363 aa)
	LOC107094607	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (153 aa)
	aamp	Angio-associated, migratory cell protein. (416 aa)
	LOC107081901	Uncharacterized protein; Belongs to the peptidase C14A family. (386 aa)
	ENSCVAP00000003282	CARD domain-containing protein. (98 aa)
	LOC107081895	Uncharacterized protein; Belongs to the peptidase C14A family. (410 aa)
	rps27a	Ribosomal protein S27a. (181 aa)
	ENSCVAP00000006380	CARD domain-containing protein. (120 aa)
	LOC107101432	Mitogen-activated protein kinase. (360 aa)
	LOC107093889	Cylindromatosis (turban tumor syndrome), b. (733 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCVAP00000003282	birc2	ENSCVAP00000003282	ENSCVAP00000020970	CARD domain-containing protein.	Baculoviral IAP repeat containing 2.	0.425
ENSCVAP00000003282	birc7	ENSCVAP00000003282	ENSCVAP00000012019	CARD domain-containing protein.	Baculoviral IAP repeat containing 7.	0.425
ENSCVAP00000006380	birc2	ENSCVAP00000006380	ENSCVAP00000020970	CARD domain-containing protein.	Baculoviral IAP repeat containing 2.	0.425
ENSCVAP00000006380	birc7	ENSCVAP00000006380	ENSCVAP00000012019	CARD domain-containing protein.	Baculoviral IAP repeat containing 7.	0.425
ENSCVAP00000011893	LOC107086824	ENSCVAP00000011893	ENSCVAP00000017025	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein; Belongs to the peptidase C14A family.	0.460
ENSCVAP00000011893	LOC107090247	ENSCVAP00000011893	ENSCVAP00000014052	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Mitogen-activated protein kinase kinase 6.	0.794
ENSCVAP00000011893	LOC107090723	ENSCVAP00000011893	ENSCVAP00000031618	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Ubiquitin-conjugating enzyme E2 variant 1.	0.536
ENSCVAP00000011893	LOC107091977	ENSCVAP00000011893	ENSCVAP00000028547	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.446
ENSCVAP00000011893	LOC107093312	ENSCVAP00000011893	ENSCVAP00000000157	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Cylindromatosis (turban tumor syndrome), like.	0.461
ENSCVAP00000011893	LOC107093789	ENSCVAP00000011893	ENSCVAP00000010683	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.	0.440
ENSCVAP00000011893	LOC107093889	ENSCVAP00000011893	ENSCVAP00000007972	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Cylindromatosis (turban tumor syndrome), b.	0.461
ENSCVAP00000011893	LOC107094607	ENSCVAP00000011893	ENSCVAP00000001617	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.873
ENSCVAP00000011893	LOC107103559	ENSCVAP00000011893	ENSCVAP00000023217	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Ubiquitin-conjugating enzyme E2Nb; Belongs to the ubiquitin-conjugating enzyme family.	0.873
ENSCVAP00000011893	MAP2K6	ENSCVAP00000011893	ENSCVAP00000010075	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Mitogen-activated protein kinase kinase 6.	0.794
ENSCVAP00000011893	RIPK2	ENSCVAP00000011893	ENSCVAP00000030122	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Receptor interacting serine/threonine kinase 2.	0.706
ENSCVAP00000011893	birc2	ENSCVAP00000011893	ENSCVAP00000020970	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Baculoviral IAP repeat containing 2.	0.718
ENSCVAP00000011893	birc7	ENSCVAP00000011893	ENSCVAP00000012019	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Baculoviral IAP repeat containing 7.	0.718
ENSCVAP00000011893	cyld	ENSCVAP00000011893	ENSCVAP00000017451	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.	0.461
ENSCVAP00000011893	nod1	ENSCVAP00000011893	ENSCVAP00000018896	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Nucleotide-binding oligomerization domain containing 1.	0.425
ENSCVAP00000011893	rps27a	ENSCVAP00000011893	ENSCVAP00000003612	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Ribosomal protein S27a.	0.581