14 items (Cyprinodon variegatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	crkl	V-crk avian sarcoma virus CT10 oncogene homolog-like. (308 aa)
	crk	CRK proto-oncogene, adaptor protein. (310 aa)
	LOC107101302	Nerve growth factor b (beta polypeptide); Belongs to the NGF-beta family. (197 aa)
	LOC107084710	ANK_REP_REGION domain-containing protein. (1622 aa)
	LOC107101186	Mitogen-activated protein kinase. (379 aa)
	rapgef1	Rap guanine nucleotide exchange factor (GEF) 1b. (1217 aa)
	map2k2	Mitogen-activated protein kinase kinase 2a; Belongs to the protein kinase superfamily. (399 aa)
	mapk1	Mitogen-activated protein kinase. (351 aa)
	LOC107089581	Kinase D-interacting substrate 220b. (1649 aa)
	LOC107081852	Uncharacterized protein. (318 aa)
	map2k1	Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily. (395 aa)
	LOC107087023	Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family. (287 aa)
	nkpd1	NTPase, KAP family P-loop domain containing 1. (715 aa)
	frs2	Fibroblast growth factor receptor substrate 2b. (531 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107081852	LOC107084710	ENSCVAP00000024362	ENSCVAP00000012877	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.526
LOC107081852	LOC107089581	ENSCVAP00000024362	ENSCVAP00000018940	Uncharacterized protein.	Kinase D-interacting substrate 220b.	0.526
LOC107081852	crk	ENSCVAP00000024362	ENSCVAP00000011522	Uncharacterized protein.	CRK proto-oncogene, adaptor protein.	0.901
LOC107081852	crkl	ENSCVAP00000024362	ENSCVAP00000026819	Uncharacterized protein.	V-crk avian sarcoma virus CT10 oncogene homolog-like.	0.911
LOC107081852	frs2	ENSCVAP00000024362	ENSCVAP00000026559	Uncharacterized protein.	Fibroblast growth factor receptor substrate 2b.	0.658
LOC107081852	nkpd1	ENSCVAP00000024362	ENSCVAP00000024697	Uncharacterized protein.	NTPase, KAP family P-loop domain containing 1.	0.526
LOC107081852	rapgef1	ENSCVAP00000024362	ENSCVAP00000013070	Uncharacterized protein.	Rap guanine nucleotide exchange factor (GEF) 1b.	0.991
LOC107084710	LOC107081852	ENSCVAP00000012877	ENSCVAP00000024362	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.526
LOC107084710	LOC107087023	ENSCVAP00000012877	ENSCVAP00000007664	ANK_REP_REGION domain-containing protein.	Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.	0.417
LOC107084710	crk	ENSCVAP00000012877	ENSCVAP00000011522	ANK_REP_REGION domain-containing protein.	CRK proto-oncogene, adaptor protein.	0.526
LOC107084710	crkl	ENSCVAP00000012877	ENSCVAP00000026819	ANK_REP_REGION domain-containing protein.	V-crk avian sarcoma virus CT10 oncogene homolog-like.	0.526
LOC107087023	LOC107084710	ENSCVAP00000007664	ENSCVAP00000012877	Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.	ANK_REP_REGION domain-containing protein.	0.417
LOC107087023	LOC107089581	ENSCVAP00000007664	ENSCVAP00000018940	Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.	Kinase D-interacting substrate 220b.	0.417
LOC107087023	LOC107101302	ENSCVAP00000007664	ENSCVAP00000009277	Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.	Nerve growth factor b (beta polypeptide); Belongs to the NGF-beta family.	0.901
LOC107087023	frs2	ENSCVAP00000007664	ENSCVAP00000026559	Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.	Fibroblast growth factor receptor substrate 2b.	0.436
LOC107087023	nkpd1	ENSCVAP00000007664	ENSCVAP00000024697	Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.	NTPase, KAP family P-loop domain containing 1.	0.417
LOC107087023	rapgef1	ENSCVAP00000007664	ENSCVAP00000013070	Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.	Rap guanine nucleotide exchange factor (GEF) 1b.	0.573
LOC107089581	LOC107081852	ENSCVAP00000018940	ENSCVAP00000024362	Kinase D-interacting substrate 220b.	Uncharacterized protein.	0.526
LOC107089581	LOC107087023	ENSCVAP00000018940	ENSCVAP00000007664	Kinase D-interacting substrate 220b.	Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.	0.417
LOC107089581	crk	ENSCVAP00000018940	ENSCVAP00000011522	Kinase D-interacting substrate 220b.	CRK proto-oncogene, adaptor protein.	0.526