STRINGSTRING
fndc3a fndc3a fndc3b fndc3b LOC107087409 LOC107087409 SRC SRC tjp1 tjp1 LOC107094788 LOC107094788
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fndc3aFibronectin type III domain containing 3A. (1234 aa)
fndc3bFibronectin type III domain containing 3Ba. (1207 aa)
LOC107087409Tight junction protein 1b; Belongs to the MAGUK family. (1574 aa)
SRCTyrosine-protein kinase. (551 aa)
tjp1Tight junction protein 1a; Belongs to the MAGUK family. (1760 aa)
LOC107094788Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (387 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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