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WDR77 WDR77 nup205 nup205 gemin7 gemin7 rae1 rae1 nup107 nup107 prmt5 prmt5 gemin6 gemin6 LOC107083817 LOC107083817 nup50 nup50 SNRPD2 SNRPD2 nup42 nup42 nup93 nup93 nup160 nup160 ndc1 ndc1 snrpg snrpg gemin4 gemin4 nup133 nup133 SNRPN SNRPN ddx20 ddx20 LOC107090301 LOC107090301 NUP54 NUP54 Snrpf Snrpf aaas aaas ranbp2 ranbp2 LOC107091957 LOC107091957 tpr tpr ENSCVAP00000015390 ENSCVAP00000015390 snrpd1 snrpd1 nup155 nup155 ENSCVAP00000020777 ENSCVAP00000020777 Nup88 Nup88 gemin8 gemin8 sec13 sec13 Seh1l Seh1l clns1a clns1a snupn snupn nup210 nup210 LOC107081054 LOC107081054 nup188 nup188 nup37 nup37 NUP62 NUP62 nup98 nup98 snrpe snrpe nup153 nup153 gemin5 gemin5 nup43 nup43 snrpd3 snrpd3 nup35 nup35 nup85 nup85 gemin2 gemin2 nup58 nup58
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
WDR77WD repeat domain 77. (335 aa)
nup205Nucleoporin 205. (1988 aa)
gemin7Gem (nuclear organelle) associated protein 7. (126 aa)
rae1Ribonucleic acid export 1. (368 aa)
nup107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (878 aa)
prmt5Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily. (653 aa)
gemin6Gem (nuclear organelle) associated protein 6. (176 aa)
LOC107083817Survival of motor neuron 1, telomeric. (284 aa)
nup50Nucleoporin 50. (447 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2. (121 aa)
nup42C3H1-type domain-containing protein. (407 aa)
nup93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (820 aa)
nup160Nucleoporin 160. (1142 aa)
ndc1NDC1 transmembrane nucleoporin. (669 aa)
snrpgSmall nuclear ribonucleoprotein G. (76 aa)
gemin4Gem (nuclear organelle) associated protein 4. (1031 aa)
nup133Nucleoporin 133. (1135 aa)
SNRPNSmall nuclear ribonucleoprotein-associated protein. (241 aa)
ddx20DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family. (767 aa)
LOC107090301POM121 transmembrane nucleoporin. (1152 aa)
NUP54Nucleoporin 54. (566 aa)
SnrpfSmall nuclear ribonucleoprotein polypeptide F. (126 aa)
aaasAchalasia, adrenocortical insufficiency, alacrimia. (518 aa)
ranbp2RAN binding protein 2. (3248 aa)
LOC107091957Translocated promoter region b, nuclear basket protein. (2192 aa)
tprTranslocated promoter region a, nuclear basket protein. (1972 aa)
ENSCVAP00000015390Uncharacterized protein. (1019 aa)
snrpd1Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (119 aa)
nup155Nucleoporin 155. (1358 aa)
ENSCVAP00000020777Nucleoporin 88. (504 aa)
Nup88Uncharacterized protein. (123 aa)
gemin8Gem (nuclear organelle) associated protein 8. (203 aa)
sec13SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (320 aa)
Seh1lSEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (188 aa)
clns1aChloride channel, nucleotide-sensitive, 1A. (251 aa)
snupnSnurportin 1. (371 aa)
nup210Nucleoporin 210. (1891 aa)
LOC107081054Small nuclear ribonucleoprotein Sm D2. (118 aa)
nup188Nucleoporin 188. (1724 aa)
nup37Nucleoporin 37. (326 aa)
NUP62Nucleoporin 62. (533 aa)
nup98Nucleoporin 98. (1810 aa)
snrpeSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
nup153Nucleoporin 153. (1409 aa)
gemin5Gem (nuclear organelle) associated protein 5. (1463 aa)
nup43Nucleoporin 43. (370 aa)
snrpd3Small nuclear ribonucleoprotein Sm D3. (127 aa)
nup35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (294 aa)
nup85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (654 aa)
gemin2Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (253 aa)
nup58Nucleoporin 58. (592 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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