STRINGSTRING
ENSCVAP00000020208 ENSCVAP00000020208 LOC107082078 LOC107082078 pum2 pum2 mtss1 mtss1 LOC107094590 LOC107094590 dnajc6 dnajc6 tpd52 tpd52 ENSCVAP00000021100 ENSCVAP00000021100 snap25 snap25 ENSCVAP00000022109 ENSCVAP00000022109 ENSCVAP00000022127 ENSCVAP00000022127 tbc1d9b tbc1d9b ap1g1 ap1g1 sh3gl2 sh3gl2 Vamp3 Vamp3 LOC107095625 LOC107095625 rsph9 rsph9 pum1 pum1 ENSCVAP00000023658 ENSCVAP00000023658 LOC107104503 LOC107104503 sulf2 sulf2 LOC107082578 LOC107082578 arrb2 arrb2 tbrg4 tbrg4 bloc1s6 bloc1s6 LOC107097716 LOC107097716 LOC107086972 LOC107086972 LOC107086970 LOC107086970 gak gak chmp2a chmp2a ENSCVAP00000027067 ENSCVAP00000027067 zfyve19 zfyve19 LOC107101268 LOC107101268 sort1 sort1 LOC107093748 LOC107093748 LOC107090524 LOC107090524 igf2r igf2r LOC107101171 LOC107101171 ENSCVAP00000029403 ENSCVAP00000029403 vamp7 vamp7 Snx2 Snx2 bloc1s3 bloc1s3 sh3d19 sh3d19 AP3S1 AP3S1 AP1M2 AP1M2 tpd52l2 tpd52l2 LOC107083543 LOC107083543 zfyve1 zfyve1 tbc1d8b tbc1d8b snx9 snx9 ap5m1 ap5m1 LOC107095773 LOC107095773 ap4m1 ap4m1 gns gns hgs hgs CTSZ CTSZ MTSS1 MTSS1 ZFYVE1 ZFYVE1 LOC107096058 LOC107096058 LOC107101485 LOC107101485 LOC107087706 LOC107087706 LOC107094496 LOC107094496 LOC107095623 LOC107095623 LOC107097192 LOC107097192 ENSCVAP00000004796 ENSCVAP00000004796 LOC107083332 LOC107083332 LOC107086509 LOC107086509 LOC107103794 LOC107103794 LOC107086522 LOC107086522 ENSCVAP00000003372 ENSCVAP00000003372 LOC107095186 LOC107095186 tpd52l1 tpd52l1 snx5 snx5 LOC107086112 LOC107086112 tbc1d9 tbc1d9 yipf6 yipf6 LOC107087202 LOC107087202 ENSCVAP00000001666 ENSCVAP00000001666 txndc5 txndc5 LOC107087306 LOC107087306 ENSCVAP00000000394 ENSCVAP00000000394 m6pr m6pr LOC107093407 LOC107093407 ENSCVAP00000008375 ENSCVAP00000008375 cpd cpd ENSCVAP00000008423 ENSCVAP00000008423 LOC107100069 LOC107100069 ENSCVAP00000009413 ENSCVAP00000009413 LOC107086539 LOC107086539 ap1m1 ap1m1 CLVS1 CLVS1 LOC107100621 LOC107100621 ap4b1 ap4b1 ENSCVAP00000010755 ENSCVAP00000010755 LOC107096572 LOC107096572 LOC107089173 LOC107089173 ap3b1 ap3b1 ENSCVAP00000011183 ENSCVAP00000011183 LOC107084222 LOC107084222 LOC107097085 LOC107097085 LOC107095424 LOC107095424 tfrc tfrc cltb cltb ENSCVAP00000012090 ENSCVAP00000012090 LOC107101213 LOC107101213 mtss2 mtss2 ap3s2 ap3s2 ENSCVAP00000014456 ENSCVAP00000014456 LOC107082769 LOC107082769 bloc1s1 bloc1s1 snapin snapin LOC107087947 LOC107087947 LOC107093621 LOC107093621 LOC107102192 LOC107102192 arpin arpin APP APP LOC107102182 LOC107102182 golgb1 golgb1 LOC107095911 LOC107095911 clta clta LOC107090708 LOC107090708 tbc1d8 tbc1d8 clvs2 clvs2 AP1S2 AP1S2 cttn cttn acbd3 acbd3 arrb1 arrb1 LOC107089004 LOC107089004 LOC107103953 LOC107103953 LOC107087290 LOC107087290 LOC107087826 LOC107087826 dtnbp1 dtnbp1 LOC107093445 LOC107093445 Vamp1 Vamp1 sulf1 sulf1 LOC107082258 LOC107082258 ENSCVAP00000020151 ENSCVAP00000020151 LOC107093198 LOC107093198
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSCVAP00000020208Adaptin_N domain-containing protein. (158 aa)
LOC107082078Si:dkey-28n18.9. (369 aa)
pum2Pumilio RNA-binding family member 2. (1292 aa)
mtss1IMD domain-containing protein. (782 aa)
LOC107094590Sortilin-related VPS10 domain containing receptor 2. (914 aa)
dnajc6DnaJ (Hsp40) homolog, subfamily C, member 6. (902 aa)
tpd52Tumor protein D52. (190 aa)
ENSCVAP00000021100Uncharacterized protein. (279 aa)
snap25Synaptosomal-associated protein; Belongs to the SNAP-25 family. (204 aa)
ENSCVAP00000022109AP4E_app_platf domain-containing protein. (432 aa)
ENSCVAP00000022127Glucosamine (N-acetyl)-6-sulfatase (Sanfilippo disease IIID), b. (353 aa)
tbc1d9bTBC1 domain family, member 9 (with GRAM domain). (1205 aa)
ap1g1AP-1 complex subunit gamma. (820 aa)
sh3gl2Uncharacterized protein. (351 aa)
Vamp3V-SNARE coiled-coil homology domain-containing protein. (109 aa)
LOC107095625Sortilin related VPS10 domain containing receptor 1. (880 aa)
rsph9Radial spoke head 9 homolog. (275 aa)
pum1Pumilio RNA-binding family member 1. (1163 aa)
ENSCVAP00000023658AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (121 aa)
LOC107104503Amyloid beta (A4) precursor protein b. (725 aa)
sulf2Extracellular sulfatase. (883 aa)
LOC107082578Vesicle-associated membrane protein 2. (150 aa)
arrb2Arrestin, beta 2a. (407 aa)
tbrg4Transforming growth factor beta regulator 4. (634 aa)
bloc1s6Biogenesis of lysosome-related organelles complex 1 subunit 6; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO), such as platelet dense granules and melanosomes. In concert with the AP-3 complex, the BLOC-1 complex is required to target membrane protein cargos into vesicles assembled at cell bodies for delivery into neurites and nerve terminals. The BLOC-1 complex, in association with SNARE proteins, is also proposed to be involved in neurite extension. May play a role in intracellular vesicle trafficking, particular [...] (171 aa)
LOC107097716Uncharacterized protein. (4568 aa)
LOC107086972VPS10 domain-containing protein. (932 aa)
LOC107086970PKD domain-containing protein. (1305 aa)
gakCyclin G associated kinase. (1313 aa)
chmp2aCharged multivesicular body protein 2A. (220 aa)
ENSCVAP00000027067Si:dkey-25o16.4. (1590 aa)
zfyve19Zinc finger, FYVE domain containing 19. (425 aa)
LOC107101268Uncharacterized protein. (376 aa)
sort1Sortilin. (822 aa)
LOC107093748Synaptosomal-associated protein; Belongs to the SNAP-25 family. (233 aa)
LOC107090524Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. (228 aa)
igf2rInsulin-like growth factor 2 receptor. (2382 aa)
LOC107101171Sortilin. (522 aa)
ENSCVAP00000029403Golgi brefeldin A resistant guanine nucleotide exchange factor 1. (801 aa)
vamp7Synaptobrevin-like 1; Belongs to the synaptobrevin family. (220 aa)
Snx2Sorting nexin 2. (302 aa)
bloc1s3Biogenesis of lysosome-related organelles complex 1 subunit 3; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO). Belongs to the BLOC1S3 family. (197 aa)
sh3d19SH3 domain containing 19. (703 aa)
AP3S1Adaptor related protein complex 3 subunit sigma 1. (174 aa)
AP1M2AP-1 complex subunit mu-2; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules. (427 aa)
tpd52l2Tpd52 like 2b. (223 aa)
LOC107083543Deoxyribonuclease II, lysosomal. (378 aa)
zfyve1Zinc finger, FYVE domain containing 1. (774 aa)
tbc1d8bTBC1 domain family member 8B. (1094 aa)
snx9Sorting nexin 9b. (629 aa)
ap5m1Adaptor related protein complex 5 subunit mu 1; Belongs to the adaptor complexes medium subunit family. (489 aa)
LOC107095773AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (151 aa)
ap4m1AP-4 complex subunit mu-1; Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways. AP-4 forms a non clathrin- associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system. It is also involved in protein sorting to the basolateral membrane in epithelial cells and the proper asym [...] (437 aa)
gnsN-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family. (540 aa)
hgsHepatocyte growth factor-regulated tyrosine kinase substrate. (772 aa)
CTSZCathepsin Z; Belongs to the peptidase C1 family. (297 aa)
MTSS1MTSS I-BAR domain containing 1. (810 aa)
ZFYVE1Uncharacterized protein. (621 aa)
LOC107096058Sorting nexin 6. (379 aa)
LOC107101485Dynamin 2b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (858 aa)
LOC107087706AP-1 complex subunit gamma. (798 aa)
LOC107094496Si:ch211-11n16.2. (655 aa)
LOC107095623Sortilin related VPS10 domain containing receptor 3b. (1214 aa)
LOC107097192Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. (176 aa)
ENSCVAP00000004796Uncharacterized protein. (193 aa)
LOC107083332Sortilin. (716 aa)
LOC107086509Vesicle-associated membrane protein 8 (endobrevin). (124 aa)
LOC107103794AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (155 aa)
LOC107086522Sorting nexin 1b. (512 aa)
ENSCVAP00000003372Adaptin_N domain-containing protein. (355 aa)
LOC107095186Adaptor related protein complex 1 subunit mu 3; Belongs to the adaptor complexes medium subunit family. (444 aa)
tpd52l1Tpd52 like 1. (331 aa)
snx5Sorting nexin; Involved in several stages of intracellular trafficking. (398 aa)
LOC107086112V-SNARE coiled-coil homology domain-containing protein. (119 aa)
tbc1d9TBC1 domain family, member 9 (with GRAM domain). (1256 aa)
yipf6Protein YIPF. (228 aa)
LOC107087202Deoxyribonuclease II beta. (361 aa)
ENSCVAP00000001666Uncharacterized protein. (191 aa)
txndc5Thioredoxin domain containing 5; Belongs to the protein disulfide isomerase family. (411 aa)
LOC107087306AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (156 aa)
ENSCVAP00000000394Synaptosomal-associated protein; Belongs to the SNAP-25 family. (231 aa)
m6prMannose-6-phosphate receptor (cation dependent). (278 aa)
LOC107093407Dynamin 2a; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (869 aa)
ENSCVAP00000008375Uncharacterized protein. (101 aa)
cpdCarboxypeptidase D, a. (1356 aa)
ENSCVAP00000008423Uncharacterized protein. (178 aa)
LOC107100069Sorting nexin 1a. (739 aa)
ENSCVAP00000009413Adaptor related protein complex 1 subunit sigma 1. (84 aa)
LOC107086539Clathrin interactor 1a. (615 aa)
ap1m1AP-1 complex subunit mu-1; Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules. (423 aa)
CLVS1Clavesin 1. (320 aa)
LOC107100621Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. (177 aa)
ap4b1Adaptor related protein complex 4 subunit beta 1. (766 aa)
ENSCVAP00000010755Uncharacterized protein. (204 aa)
LOC107096572SH3 domain containing GRB2 like 2a, endophilin A1. (363 aa)
LOC107089173Cathepsin Z; Belongs to the peptidase C1 family. (313 aa)
ap3b1AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. (1122 aa)
ENSCVAP00000011183Uncharacterized protein. (304 aa)
LOC107084222ENTH domain-containing protein. (671 aa)
LOC107097085Uncharacterized protein. (725 aa)
LOC107095424Pept_C1 domain-containing protein; Belongs to the peptidase C1 family. (308 aa)
tfrcTransferrin receptor 1a. (769 aa)
cltbClathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (197 aa)
ENSCVAP00000012090Uncharacterized protein. (121 aa)
LOC107101213Ferritin, lower subunit-like. (176 aa)
mtss2MTSS I-BAR domain containing 2a. (779 aa)
ap3s2Adaptor related protein complex 3 subunit sigma 2. (192 aa)
ENSCVAP00000014456Uncharacterized protein. (290 aa)
LOC107082769Clat_adaptor_s domain-containing protein. (133 aa)
bloc1s1Biogenesis of lysosomal organelles complex-1, subunit 1. (125 aa)
snapinSNAP associated protein. (129 aa)
LOC107087947IMD domain-containing protein. (752 aa)
LOC107093621Uncharacterized protein. (983 aa)
LOC107102192PX domain-containing protein. (360 aa)
arpinActin related protein 2/3 complex inhibitor. (226 aa)
APPAmyloid beta precursor protein. (762 aa)
LOC107102182Si:ch73-234b20.5. (103 aa)
golgb1Golgin B1. (2802 aa)
LOC107095911Hematopoietic cell-specific Lyn substrate 1. (514 aa)
cltaClathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (232 aa)
LOC107090708Tpd52 like 2a. (208 aa)
tbc1d8Rab-GAP TBC domain-containing protein. (1111 aa)
clvs2Clavesin 2. (347 aa)
AP1S2AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (167 aa)
cttnCortactin. (472 aa)
acbd3Acyl-Coenzyme A binding domain containing 3. (545 aa)
arrb1Arrestin, beta 1. (416 aa)
LOC107089004NECAP endocytosis associated 1. (263 aa)
LOC107103953Uncharacterized protein. (282 aa)
LOC107087290Huntingtin interacting protein 1 related b. (1067 aa)
LOC107087826Biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino. (244 aa)
dtnbp1Dystrobrevin binding protein 1b. (220 aa)
LOC107093445IMD domain-containing protein. (133 aa)
Vamp1Zgc:92912. (125 aa)
sulf1Extracellular sulfatase. (867 aa)
LOC107082258DUF1681 domain-containing protein. (252 aa)
ENSCVAP00000020151Sulfatase domain-containing protein. (300 aa)
LOC107093198Adaptin_N domain-containing protein. (554 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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