STRINGSTRING
LOC107085894 LOC107085894 ppp2ca ppp2ca ppp2r1b ppp2r1b LOC107103198 LOC107103198 LOC107088171 LOC107088171 vrk3 vrk3 mapk7 mapk7 LOC107104997 LOC107104997 ppp4r1 ppp4r1 mapk1 mapk1 ppp4r4 ppp4r4 LOC107084657 LOC107084657 LOC107101186 LOC107101186 dusp6 dusp6 dusp3 dusp3 relch relch fnbp4 fnbp4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107085894Serine/threonine-protein phosphatase. (309 aa)
ppp2caSerine/threonine-protein phosphatase. (314 aa)
ppp2r1bProtein phosphatase 2, regulatory subunit A, beta b. (589 aa)
LOC107103198Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (384 aa)
LOC107088171Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (393 aa)
vrk3VRK serine/threonine kinase 3. (511 aa)
mapk7Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (1095 aa)
LOC107104997Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (218 aa)
ppp4r1WRNPLPNID domain-containing protein. (975 aa)
mapk1Mitogen-activated protein kinase. (351 aa)
ppp4r4Protein phosphatase 4, regulatory subunit 4. (749 aa)
LOC107084657Serine/threonine-protein phosphatase. (309 aa)
LOC107101186Mitogen-activated protein kinase. (379 aa)
dusp6Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (384 aa)
dusp3Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (219 aa)
relchRAB11 binding and LisH domain, coiled-coil and HEAT repeat containing. (1212 aa)
fnbp4Formin binding protein 4. (878 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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