12 items (Cyprinodon variegatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Wasl	WH1 domain-containing protein. (103 aa)
	cav1	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (180 aa)
	LOC107088342	WASP like actin nucleation promoting factor b. (516 aa)
	LOC107101485	Dynamin 2b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (858 aa)
	nostrin	Nitric oxide synthase trafficking. (492 aa)
	LOC107093407	Dynamin 2a; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (869 aa)
	LOC107094531	FH2 domain-containing protein. (1138 aa)
	LOC107093336	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (161 aa)
	LOC107093348	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (152 aa)
	was	Uncharacterized protein. (536 aa)
	FMN1	Formin 1. (1287 aa)
	ENSCVAP00000013497	FH2 domain-containing protein. (245 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107088342	LOC107093336	ENSCVAP00000005556	ENSCVAP00000019963	WASP like actin nucleation promoting factor b.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.474
LOC107088342	LOC107093348	ENSCVAP00000005556	ENSCVAP00000019962	WASP like actin nucleation promoting factor b.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.587
LOC107088342	LOC107093407	ENSCVAP00000005556	ENSCVAP00000000088	WASP like actin nucleation promoting factor b.	Dynamin 2a; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.474
LOC107088342	LOC107101485	ENSCVAP00000005556	ENSCVAP00000005359	WASP like actin nucleation promoting factor b.	Dynamin 2b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.474
LOC107088342	Wasl	ENSCVAP00000005556	ENSCVAP00000008065	WASP like actin nucleation promoting factor b.	WH1 domain-containing protein.	0.900
LOC107088342	cav1	ENSCVAP00000005556	ENSCVAP00000007154	WASP like actin nucleation promoting factor b.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.516
LOC107093336	LOC107088342	ENSCVAP00000019963	ENSCVAP00000005556	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	WASP like actin nucleation promoting factor b.	0.474
LOC107093336	LOC107093348	ENSCVAP00000019963	ENSCVAP00000019962	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.581
LOC107093336	LOC107093407	ENSCVAP00000019963	ENSCVAP00000000088	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Dynamin 2a; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.482
LOC107093336	LOC107101485	ENSCVAP00000019963	ENSCVAP00000005359	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Dynamin 2b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.482
LOC107093336	Wasl	ENSCVAP00000019963	ENSCVAP00000008065	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	WH1 domain-containing protein.	0.474
LOC107093336	was	ENSCVAP00000019963	ENSCVAP00000018444	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Uncharacterized protein.	0.489
LOC107093348	LOC107088342	ENSCVAP00000019962	ENSCVAP00000005556	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	WASP like actin nucleation promoting factor b.	0.587
LOC107093348	LOC107093336	ENSCVAP00000019962	ENSCVAP00000019963	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.581
LOC107093348	LOC107093407	ENSCVAP00000019962	ENSCVAP00000000088	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Dynamin 2a; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.598
LOC107093348	LOC107101485	ENSCVAP00000019962	ENSCVAP00000005359	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Dynamin 2b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.598
LOC107093348	Wasl	ENSCVAP00000019962	ENSCVAP00000008065	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	WH1 domain-containing protein.	0.587
LOC107093348	cav1	ENSCVAP00000019962	ENSCVAP00000007154	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.562
LOC107093348	was	ENSCVAP00000019962	ENSCVAP00000018444	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Uncharacterized protein.	0.597
LOC107093407	LOC107088342	ENSCVAP00000000088	ENSCVAP00000005556	Dynamin 2a; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	WASP like actin nucleation promoting factor b.	0.474