STRINGSTRING
LOC107086704 LOC107086704 ptpn6 ptpn6 itgb3 itgb3 lck lck fndc3a fndc3a inpp5d inpp5d LOC107099959 LOC107099959 LOC107091676 LOC107091676 fyn fyn fndc3b fndc3b ENSCVAP00000012418 ENSCVAP00000012418 LOC107084752 LOC107084752 SRC SRC plcg1 plcg1 LOC107085517 LOC107085517 ptpn11 ptpn11 LOC107096191 LOC107096191 YES1 YES1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC107086704Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (594 aa)
ptpn6Protein tyrosine phosphatase non-receptor type 6. (583 aa)
itgb3Integrin beta; Belongs to the integrin beta chain family. (792 aa)
lckTyrosine-protein kinase. (500 aa)
fndc3aFibronectin type III domain containing 3A. (1234 aa)
inpp5dInositol polyphosphate-5-phosphatase D. (1112 aa)
LOC107099959Tyrosine-protein kinase. (547 aa)
LOC107091676Tyrosine-protein kinase. (510 aa)
fynTyrosine-protein kinase. (537 aa)
fndc3bFibronectin type III domain containing 3Ba. (1207 aa)
ENSCVAP00000012418Platelet/endothelial cell adhesion molecule 1. (645 aa)
LOC107084752Integrin beta; Belongs to the integrin beta chain family. (762 aa)
SRCTyrosine-protein kinase. (551 aa)
plcg11-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades. (1310 aa)
LOC107085517Si:dkey-237i9.8. (687 aa)
ptpn11Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (600 aa)
LOC107096191Tyrosine-protein kinase. (537 aa)
YES1Tyrosine-protein kinase. (589 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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