16 items (Cyprinodon variegatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PAK2	Non-specific serine/threonine protein kinase. (510 aa)
	grb2	Growth factor receptor-bound protein 2b. (217 aa)
	cd276	CD276 molecule. (298 aa)
	vtcn1	V-set domain containing T cell activation inhibitor 1. (272 aa)
	pak1	Non-specific serine/threonine protein kinase. (563 aa)
	CDC42	Cell division cycle 42. (191 aa)
	ENSCVAP00000005673	Ig-like domain-containing protein. (125 aa)
	LOC107086129	Uncharacterized protein. (191 aa)
	LOC107096191	Tyrosine-protein kinase. (537 aa)
	LOC107093724	Uncharacterized protein. (229 aa)
	pak2	Non-specific serine/threonine protein kinase. (528 aa)
	fyn	Tyrosine-protein kinase. (537 aa)
	LOC107082256	Uncharacterized protein. (191 aa)
	PAK3	Non-specific serine/threonine protein kinase. (554 aa)
	LOC107085118	Uncharacterized protein. (191 aa)
	lck	Tyrosine-protein kinase. (500 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC42	LOC107096191	ENSCVAP00000021883	ENSCVAP00000002214	Cell division cycle 42.	Tyrosine-protein kinase.	0.483
CDC42	PAK2	ENSCVAP00000021883	ENSCVAP00000029676	Cell division cycle 42.	Non-specific serine/threonine protein kinase.	0.940
CDC42	PAK3	ENSCVAP00000021883	ENSCVAP00000019890	Cell division cycle 42.	Non-specific serine/threonine protein kinase.	0.958
CDC42	fyn	ENSCVAP00000021883	ENSCVAP00000019767	Cell division cycle 42.	Tyrosine-protein kinase.	0.483
CDC42	grb2	ENSCVAP00000021883	ENSCVAP00000009535	Cell division cycle 42.	Growth factor receptor-bound protein 2b.	0.688
CDC42	lck	ENSCVAP00000021883	ENSCVAP00000030641	Cell division cycle 42.	Tyrosine-protein kinase.	0.439
CDC42	pak1	ENSCVAP00000021883	ENSCVAP00000024754	Cell division cycle 42.	Non-specific serine/threonine protein kinase.	0.958
CDC42	pak2	ENSCVAP00000021883	ENSCVAP00000012989	Cell division cycle 42.	Non-specific serine/threonine protein kinase.	0.940
ENSCVAP00000005673	vtcn1	ENSCVAP00000005673	ENSCVAP00000028068	Ig-like domain-containing protein.	V-set domain containing T cell activation inhibitor 1.	0.439
LOC107082256	PAK2	ENSCVAP00000000232	ENSCVAP00000029676	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.905
LOC107082256	PAK3	ENSCVAP00000000232	ENSCVAP00000019890	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.905
LOC107082256	grb2	ENSCVAP00000000232	ENSCVAP00000009535	Uncharacterized protein.	Growth factor receptor-bound protein 2b.	0.590
LOC107082256	pak1	ENSCVAP00000000232	ENSCVAP00000024754	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.905
LOC107082256	pak2	ENSCVAP00000000232	ENSCVAP00000012989	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.905
LOC107085118	LOC107096191	ENSCVAP00000031124	ENSCVAP00000002214	Uncharacterized protein.	Tyrosine-protein kinase.	0.483
LOC107085118	PAK2	ENSCVAP00000031124	ENSCVAP00000029676	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.940
LOC107085118	PAK3	ENSCVAP00000031124	ENSCVAP00000019890	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.958
LOC107085118	fyn	ENSCVAP00000031124	ENSCVAP00000019767	Uncharacterized protein.	Tyrosine-protein kinase.	0.483
LOC107085118	grb2	ENSCVAP00000031124	ENSCVAP00000009535	Uncharacterized protein.	Growth factor receptor-bound protein 2b.	0.688
LOC107085118	lck	ENSCVAP00000031124	ENSCVAP00000030641	Uncharacterized protein.	Tyrosine-protein kinase.	0.439