STRINGSTRING
fndc3b fndc3b ENSCVAP00000011918 ENSCVAP00000011918 SRC SRC rtn4rl2 rtn4rl2 LOC107088178 LOC107088178 LOC107097738 LOC107097738 LOC107102379 LOC107102379 gp1bb gp1bb fndc3a fndc3a LOC107101017 LOC107101017 col1a2 col1a2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fndc3bFibronectin type III domain containing 3Ba. (1207 aa)
ENSCVAP00000011918Uncharacterized protein. (287 aa)
SRCTyrosine-protein kinase. (551 aa)
rtn4rl2Reticulon 4 receptor-like 2 a. (456 aa)
LOC107088178Glycoprotein IX (platelet). (257 aa)
LOC107097738Collagen, type I, alpha 1a. (1445 aa)
LOC107102379Collagen, type I, alpha 1b. (1328 aa)
gp1bbGlycoprotein Ib platelet subunit beta. (207 aa)
fndc3aFibronectin type III domain containing 3A. (1234 aa)
LOC107101017Reticulon 4 receptor-like 2b. (460 aa)
col1a2Collagen, type I, alpha 2. (1318 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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