11 items (Cyprinodon variegatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mapk1	Mitogen-activated protein kinase. (351 aa)
	PAK3	Non-specific serine/threonine protein kinase. (554 aa)
	pak1	Non-specific serine/threonine protein kinase. (563 aa)
	ENSCVAP00000008000	Uncharacterized protein. (338 aa)
	ENSCVAP00000001622	Uncharacterized protein. (820 aa)
	hmcn2	Hemicentin 2. (4166 aa)
	map2k1	Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily. (395 aa)
	hmcn1	Hemicentin 1. (5521 aa)
	LOC107101186	Mitogen-activated protein kinase. (379 aa)
	map2k2	Mitogen-activated protein kinase kinase 2a; Belongs to the protein kinase superfamily. (399 aa)
	MCMDC2	Minichromosome maintenance domain containing 2. (680 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107101186	PAK3	ENSCVAP00000013006	ENSCVAP00000019890	Mitogen-activated protein kinase.	Non-specific serine/threonine protein kinase.	0.446
LOC107101186	map2k1	ENSCVAP00000013006	ENSCVAP00000004697	Mitogen-activated protein kinase.	Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.	0.978
LOC107101186	map2k2	ENSCVAP00000013006	ENSCVAP00000014852	Mitogen-activated protein kinase.	Mitogen-activated protein kinase kinase 2a; Belongs to the protein kinase superfamily.	0.978
LOC107101186	mapk1	ENSCVAP00000013006	ENSCVAP00000015363	Mitogen-activated protein kinase.	Mitogen-activated protein kinase.	0.901
LOC107101186	pak1	ENSCVAP00000013006	ENSCVAP00000024754	Mitogen-activated protein kinase.	Non-specific serine/threonine protein kinase.	0.446
PAK3	LOC107101186	ENSCVAP00000019890	ENSCVAP00000013006	Non-specific serine/threonine protein kinase.	Mitogen-activated protein kinase.	0.446
PAK3	map2k1	ENSCVAP00000019890	ENSCVAP00000004697	Non-specific serine/threonine protein kinase.	Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.	0.922
PAK3	mapk1	ENSCVAP00000019890	ENSCVAP00000015363	Non-specific serine/threonine protein kinase.	Mitogen-activated protein kinase.	0.443
PAK3	pak1	ENSCVAP00000019890	ENSCVAP00000024754	Non-specific serine/threonine protein kinase.	Non-specific serine/threonine protein kinase.	0.901
map2k1	LOC107101186	ENSCVAP00000004697	ENSCVAP00000013006	Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.	Mitogen-activated protein kinase.	0.978
map2k1	PAK3	ENSCVAP00000004697	ENSCVAP00000019890	Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.	Non-specific serine/threonine protein kinase.	0.922
map2k1	map2k2	ENSCVAP00000004697	ENSCVAP00000014852	Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.	Mitogen-activated protein kinase kinase 2a; Belongs to the protein kinase superfamily.	0.901
map2k1	mapk1	ENSCVAP00000004697	ENSCVAP00000015363	Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.	Mitogen-activated protein kinase.	0.978
map2k1	pak1	ENSCVAP00000004697	ENSCVAP00000024754	Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.	Non-specific serine/threonine protein kinase.	0.922
map2k2	LOC107101186	ENSCVAP00000014852	ENSCVAP00000013006	Mitogen-activated protein kinase kinase 2a; Belongs to the protein kinase superfamily.	Mitogen-activated protein kinase.	0.978
map2k2	map2k1	ENSCVAP00000014852	ENSCVAP00000004697	Mitogen-activated protein kinase kinase 2a; Belongs to the protein kinase superfamily.	Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.	0.901
map2k2	mapk1	ENSCVAP00000014852	ENSCVAP00000015363	Mitogen-activated protein kinase kinase 2a; Belongs to the protein kinase superfamily.	Mitogen-activated protein kinase.	0.978
mapk1	LOC107101186	ENSCVAP00000015363	ENSCVAP00000013006	Mitogen-activated protein kinase.	Mitogen-activated protein kinase.	0.901
mapk1	PAK3	ENSCVAP00000015363	ENSCVAP00000019890	Mitogen-activated protein kinase.	Non-specific serine/threonine protein kinase.	0.443
mapk1	map2k1	ENSCVAP00000015363	ENSCVAP00000004697	Mitogen-activated protein kinase.	Mitogen-activated protein kinase kinase 1; Belongs to the protein kinase superfamily.	0.978