18 items (Cyprinodon variegatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rela	V-rel avian reticuloendotheliosis viral oncogene homolog A. (622 aa)
	LOC107082160	C-type lectin domain-containing protein. (222 aa)
	PAK2	Non-specific serine/threonine protein kinase. (510 aa)
	pak1	Non-specific serine/threonine protein kinase. (563 aa)
	LOC107086116	C-type lectin domain-containing protein. (311 aa)
	PAK3	Non-specific serine/threonine protein kinase. (554 aa)
	fyn	Tyrosine-protein kinase. (537 aa)
	REL	REL proto-oncogene, NF-kB subunit. (630 aa)
	pak2	Non-specific serine/threonine protein kinase. (528 aa)
	LOC107083064	Si:ch211-66e2.5. (304 aa)
	ENSCVAP00000007328	C-type lectin domain-containing protein. (200 aa)
	ENSCVAP00000007077	C-type lectin domain-containing protein. (206 aa)
	hras	HRas proto-oncogene, GTPase a. (189 aa)
	KRAS	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog. (189 aa)
	LOC107096191	Tyrosine-protein kinase. (537 aa)
	relb	V-rel avian reticuloendotheliosis viral oncogene homolog B. (564 aa)
	LOC107095138	Zgc:55558. (187 aa)
	CSDE1	Cold shock domain containing E1, RNA-binding. (907 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSDE1	PAK2	ENSCVAP00000000427	ENSCVAP00000029676	Cold shock domain containing E1, RNA-binding.	Non-specific serine/threonine protein kinase.	0.413
CSDE1	PAK3	ENSCVAP00000000427	ENSCVAP00000019890	Cold shock domain containing E1, RNA-binding.	Non-specific serine/threonine protein kinase.	0.413
CSDE1	pak1	ENSCVAP00000000427	ENSCVAP00000024754	Cold shock domain containing E1, RNA-binding.	Non-specific serine/threonine protein kinase.	0.413
CSDE1	pak2	ENSCVAP00000000427	ENSCVAP00000012989	Cold shock domain containing E1, RNA-binding.	Non-specific serine/threonine protein kinase.	0.413
KRAS	LOC107095138	ENSCVAP00000004733	ENSCVAP00000004689	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.	Zgc:55558.	0.901
KRAS	LOC107096191	ENSCVAP00000004733	ENSCVAP00000002214	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.	Tyrosine-protein kinase.	0.415
KRAS	PAK2	ENSCVAP00000004733	ENSCVAP00000029676	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.	Non-specific serine/threonine protein kinase.	0.413
KRAS	PAK3	ENSCVAP00000004733	ENSCVAP00000019890	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.	Non-specific serine/threonine protein kinase.	0.413
KRAS	fyn	ENSCVAP00000004733	ENSCVAP00000019767	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.	Tyrosine-protein kinase.	0.415
KRAS	hras	ENSCVAP00000004733	ENSCVAP00000007057	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.	HRas proto-oncogene, GTPase a.	0.910
KRAS	pak1	ENSCVAP00000004733	ENSCVAP00000024754	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.	Non-specific serine/threonine protein kinase.	0.413
KRAS	pak2	ENSCVAP00000004733	ENSCVAP00000012989	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.	Non-specific serine/threonine protein kinase.	0.413
LOC107095138	KRAS	ENSCVAP00000004689	ENSCVAP00000004733	Zgc:55558.	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.	0.901
LOC107095138	LOC107096191	ENSCVAP00000004689	ENSCVAP00000002214	Zgc:55558.	Tyrosine-protein kinase.	0.415
LOC107095138	PAK2	ENSCVAP00000004689	ENSCVAP00000029676	Zgc:55558.	Non-specific serine/threonine protein kinase.	0.413
LOC107095138	PAK3	ENSCVAP00000004689	ENSCVAP00000019890	Zgc:55558.	Non-specific serine/threonine protein kinase.	0.413
LOC107095138	fyn	ENSCVAP00000004689	ENSCVAP00000019767	Zgc:55558.	Tyrosine-protein kinase.	0.415
LOC107095138	hras	ENSCVAP00000004689	ENSCVAP00000007057	Zgc:55558.	HRas proto-oncogene, GTPase a.	0.910
LOC107095138	pak1	ENSCVAP00000004689	ENSCVAP00000024754	Zgc:55558.	Non-specific serine/threonine protein kinase.	0.413
LOC107095138	pak2	ENSCVAP00000004689	ENSCVAP00000012989	Zgc:55558.	Non-specific serine/threonine protein kinase.	0.413