24 items (Cyprinodon variegatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107089466	Uncharacterized protein. (1506 aa)
	LOC107081972	SH3-domain GRB2-like 1b. (368 aa)
	rps27a	Ribosomal protein S27a. (181 aa)
	LOC107088377	Tyrosine-protein phosphatase non-receptor type. (405 aa)
	PTPN2	Tyrosine-protein phosphatase non-receptor type. (410 aa)
	hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate. (772 aa)
	met	MET proto-oncogene, receptor tyrosine kinase. (1414 aa)
	grb2	Growth factor receptor-bound protein 2b. (217 aa)
	LOC107096572	SH3 domain containing GRB2 like 2a, endophilin A1. (363 aa)
	stam	Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1. (521 aa)
	LOC107098202	Uncharacterized protein. (860 aa)
	sh3kbp1	Uncharacterized protein. (604 aa)
	eps15	Epidermal growth factor receptor pathway substrate 15. (1081 aa)
	ENSCVAP00000021109	Uncharacterized protein. (281 aa)
	ENSCVAP00000021287	Uncharacterized protein. (246 aa)
	sh3gl2	Uncharacterized protein. (351 aa)
	cbl	Cbl proto-oncogene, E3 ubiquitin protein ligase. (952 aa)
	ENSCVAP00000025549	Uncharacterized protein. (179 aa)
	uba52	Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
	LOC107083535	Cbl proto-oncogene C, E3 ubiquitin protein ligase. (566 aa)
	lrig1	Leucine-rich repeats and immunoglobulin-like domains 1. (1035 aa)
	sh3d21	SH3 domain containing 21. (483 aa)
	LOC107090730	Tyrosine-protein phosphatase non-receptor type. (434 aa)
	stam2	Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2. (484 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCVAP00000021109	met	ENSCVAP00000021109	ENSCVAP00000007194	Uncharacterized protein.	MET proto-oncogene, receptor tyrosine kinase.	0.697
ENSCVAP00000021287	LOC107081972	ENSCVAP00000021287	ENSCVAP00000002639	Uncharacterized protein.	SH3-domain GRB2-like 1b.	0.585
ENSCVAP00000021287	LOC107083535	ENSCVAP00000021287	ENSCVAP00000028276	Uncharacterized protein.	Cbl proto-oncogene C, E3 ubiquitin protein ligase.	0.769
ENSCVAP00000021287	LOC107096572	ENSCVAP00000021287	ENSCVAP00000010813	Uncharacterized protein.	SH3 domain containing GRB2 like 2a, endophilin A1.	0.585
ENSCVAP00000021287	LOC107098202	ENSCVAP00000021287	ENSCVAP00000013317	Uncharacterized protein.	Uncharacterized protein.	0.769
ENSCVAP00000021287	cbl	ENSCVAP00000021287	ENSCVAP00000023904	Uncharacterized protein.	Cbl proto-oncogene, E3 ubiquitin protein ligase.	0.769
ENSCVAP00000021287	eps15	ENSCVAP00000021287	ENSCVAP00000019713	Uncharacterized protein.	Epidermal growth factor receptor pathway substrate 15.	0.423
ENSCVAP00000021287	grb2	ENSCVAP00000021287	ENSCVAP00000009535	Uncharacterized protein.	Growth factor receptor-bound protein 2b.	0.709
ENSCVAP00000021287	hgs	ENSCVAP00000021287	ENSCVAP00000007114	Uncharacterized protein.	Hepatocyte growth factor-regulated tyrosine kinase substrate.	0.627
ENSCVAP00000021287	met	ENSCVAP00000021287	ENSCVAP00000007194	Uncharacterized protein.	MET proto-oncogene, receptor tyrosine kinase.	0.675
ENSCVAP00000021287	rps27a	ENSCVAP00000021287	ENSCVAP00000003612	Uncharacterized protein.	Ribosomal protein S27a.	0.789
ENSCVAP00000021287	sh3gl2	ENSCVAP00000021287	ENSCVAP00000022582	Uncharacterized protein.	Uncharacterized protein.	0.585
ENSCVAP00000021287	stam	ENSCVAP00000021287	ENSCVAP00000011376	Uncharacterized protein.	Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.	0.497
ENSCVAP00000021287	stam2	ENSCVAP00000021287	ENSCVAP00000031598	Uncharacterized protein.	Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.	0.504
ENSCVAP00000021287	uba52	ENSCVAP00000021287	ENSCVAP00000025559	Uncharacterized protein.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.759
ENSCVAP00000025549	grb2	ENSCVAP00000025549	ENSCVAP00000009535	Uncharacterized protein.	Growth factor receptor-bound protein 2b.	0.514
ENSCVAP00000025549	lrig1	ENSCVAP00000025549	ENSCVAP00000029453	Uncharacterized protein.	Leucine-rich repeats and immunoglobulin-like domains 1.	0.447
ENSCVAP00000025549	met	ENSCVAP00000025549	ENSCVAP00000007194	Uncharacterized protein.	MET proto-oncogene, receptor tyrosine kinase.	0.900
ENSCVAP00000025549	rps27a	ENSCVAP00000025549	ENSCVAP00000003612	Uncharacterized protein.	Ribosomal protein S27a.	0.488
ENSCVAP00000025549	stam	ENSCVAP00000025549	ENSCVAP00000011376	Uncharacterized protein.	Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.	0.474