STRINGSTRING
LOC107100983 LOC107100983 LOC107104293 LOC107104293 yju2 yju2 prcc prcc LOC107090405 LOC107090405 ncbp2 ncbp2 snrpg snrpg plrg1 plrg1 snrpb2 snrpb2 LOC107091875 LOC107091875 xab2 xab2 slirp slirp eftud2 eftud2 polr2h polr2h prpf38a prpf38a snw1 snw1 ENSCVAP00000010012 ENSCVAP00000010012 prpf19 prpf19 LOC107102968 LOC107102968 smu1 smu1 ENSCVAP00000009690 ENSCVAP00000009690 DHX15 DHX15 LOC107091002 LOC107091002 ddx42 ddx42 rnf113a rnf113a ENSCVAP00000009384 ENSCVAP00000009384 CSDC2 CSDC2 rnps1 rnps1 rbm22 rbm22 LOC107101867 LOC107101867 HNRNPH3 HNRNPH3 polr2f polr2f ppil3 ppil3 dhx35 dhx35 SNRPD2 SNRPD2 ppil1 ppil1 PCBP2 PCBP2 LOC107093095 LOC107093095 LOC107101924 LOC107101924 LOC107102485 LOC107102485 SART1 SART1 Rbmx2 Rbmx2 LOC107087042 LOC107087042 ENSCVAP00000007759 ENSCVAP00000007759 Hnrnpul1 Hnrnpul1 LOC107104445 LOC107104445 dhx33 dhx33 rbmx rbmx prpf31 prpf31 sf3b6 sf3b6 sf3b5 sf3b5 LOC107103205 LOC107103205 sf3b4 sf3b4 rbm5 rbm5 cactin cactin phf5a phf5a ENSCVAP00000023138 ENSCVAP00000023138 dhx32 dhx32 srsf7 srsf7 eif4a3 eif4a3 cwf19l2 cwf19l2 ctnnbl1 ctnnbl1 cdc40 cdc40 sap18 sap18 ENSCVAP00000024197 ENSCVAP00000024197 leng1 leng1 cwc25 cwc25 alyref alyref polr2b polr2b polr2l polr2l LOC107093917 LOC107093917 sde2 sde2 LOC107100820 LOC107100820 snrnp40 snrnp40 nktr nktr dhx16 dhx16 LOC107090027 LOC107090027 ZNF830 ZNF830 dhx8 dhx8 Acin1 Acin1 acin1 acin1 csdc2 csdc2 LOC107103767 LOC107103767 LOC107089377 LOC107089377 LOC107088364 LOC107088364 LOC107092722 LOC107092722 polr2a polr2a magoh magoh nkap nkap upf3b upf3b ENSCVAP00000003741 ENSCVAP00000003741 ppp1r10 ppp1r10 SUGP1 SUGP1 ENSCVAP00000003526 ENSCVAP00000003526 LOC107099697 LOC107099697 tra2b tra2b sf3a1 sf3a1 mtrex mtrex prpf40a prpf40a wdr53 wdr53 mfap1 mfap1 LOC107095679 LOC107095679 tra2a tra2a Snrnp70 Snrnp70 SRSF3 SRSF3 sf3b1 sf3b1 prkrip1 prkrip1 LOC107100344 LOC107100344 ENSCVAP00000002455 ENSCVAP00000002455 rbm25 rbm25 aqr aqr PNN PNN u2surp u2surp LOC107103912 LOC107103912 luc7l3 luc7l3 rnpc3 rnpc3 ENSCVAP00000001425 ENSCVAP00000001425 dhx34 dhx34 Srek1 Srek1 fam32a fam32a snrnp27 snrnp27 gpatch1 gpatch1 bcas2 bcas2 lin28b lin28b ENSCVAP00000000909 ENSCVAP00000000909 txnl4a txnl4a LOC107105121 LOC107105121 polr2d polr2d snrpd3 snrpd3 ppil4 ppil4 zcrb1 zcrb1 LOC107093463 LOC107093463 sf1 sf1 Srsf6 Srsf6 ppih ppih ybx1 ybx1 LOC107091193 LOC107091193 rbm17 rbm17 tprg1l tprg1l ENSCVAP00000020899 ENSCVAP00000020899 bud13 bud13 ENSCVAP00000021298 ENSCVAP00000021298 sf3b2 sf3b2 zmat2 zmat2 LOC107091769 LOC107091769 cherp cherp snrpa snrpa YBX2 YBX2 ENSCVAP00000021961 ENSCVAP00000021961 cirbp cirbp ENSCVAP00000024312 ENSCVAP00000024312 prpf4b prpf4b NCBP1 NCBP1 ENSCVAP00000024722 ENSCVAP00000024722 prpf3 prpf3 PUF60 PUF60 HNRNPUL1 HNRNPUL1 cwc22 cwc22 nol8 nol8 ENSCVAP00000025291 ENSCVAP00000025291 Prpf8 Prpf8 sf3a3 sf3a3 sf3b3 sf3b3 prpf6 prpf6 LOC107093874 LOC107093874 LOC107084290 LOC107084290 tfip11 tfip11 LOC107089850 LOC107089850 prpf18 prpf18 LOC107104328 LOC107104328 UBL5 UBL5 gtf2f1 gtf2f1 txnl4b txnl4b htatsf1 htatsf1 snrpc snrpc ptbp1 ptbp1 LOC107081054 LOC107081054 casc3 casc3 gtf2f2 gtf2f2 crnkl1 crnkl1 lsm2 lsm2 WDR25 WDR25 LOC107094832 LOC107094832 lrmda lrmda bud31 bud31 ENSCVAP00000029121 ENSCVAP00000029121 srsf5 srsf5 gpkow gpkow LOC107103475 LOC107103475 ppwd1 ppwd1 wbp11 wbp11 LOC107104618 LOC107104618 ralyl ralyl ppil2 ppil2 ENSCVAP00000030023 ENSCVAP00000030023 ENSCVAP00000030039 ENSCVAP00000030039 SMU1 SMU1 LOC107090357 LOC107090357 snrpa1 snrpa1 ppie ppie slu7 slu7 syf2 syf2 srrt srrt hnrnpd hnrnpd hnrnpl hnrnpl LOC107093566 LOC107093566 snrpe snrpe LOC107099780 LOC107099780 LOC107084137 LOC107084137 LOC107104527 LOC107104527 ENSCVAP00000031729 ENSCVAP00000031729 sf3a2 sf3a2 LOC107091295 LOC107091295 srsf2 srsf2 ENSCVAP00000032378 ENSCVAP00000032378 LOC107087836 LOC107087836 LOC107088984 LOC107088984 luc7l luc7l ddx46 ddx46 usp39 usp39 Prpf4 Prpf4 ptbp3 ptbp3 wbp4 wbp4 ENSCVAP00000018298 ENSCVAP00000018298 zmat5 zmat5 PPIG PPIG HNRNPLL HNRNPLL nsrp1 nsrp1 polr2g polr2g paxbp1 paxbp1 zrsr2 zrsr2 snrpd1 snrpd1 rbm8a rbm8a lsm8 lsm8 LOC107097501 LOC107097501 smndc1 smndc1 LOC107092507 LOC107092507 syncrip syncrip POLR2E POLR2E snrnp48 snrnp48 LOC107101884 LOC107101884 Srrm1 Srrm1 znf318 znf318 srsf10 srsf10 ik ik hnrnpa3 hnrnpa3 LOC107091385 LOC107091385 fam50a fam50a daw1 daw1 hnrnpr hnrnpr dnajc8 dnajc8 POLR2C POLR2C LOC107091937 LOC107091937 snip1 snip1 cwc27 cwc27 LOC107088613 LOC107088613 snrnp200 snrnp200 LOC107093669 LOC107093669 ppp1r8 ppp1r8 pqbp1 pqbp1 LOC107102835 LOC107102835 parpbp parpbp LOC107083529 LOC107083529 snrnp25 snrnp25 ddx23 ddx23 Snrpf Snrpf LOC107088665 LOC107088665 LOC107100576 LOC107100576 LOC107087450 LOC107087450 cdc5l cdc5l polr2i polr2i LOC107086442 LOC107086442 DDX41 DDX41 cwc15 cwc15 LOC107103552 LOC107103552 polr2j polr2j SNRPN SNRPN hnrnph1 hnrnph1 ccar1 ccar1 TCERG1 TCERG1
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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LOC107100983Heterogeneous nuclear ribonucleoprotein M. (689 aa)
LOC107104293RRM domain-containing protein. (312 aa)
yju2YJU2 splicing factor homolog. (338 aa)
prccProline rich mitotic checkpoint control factor. (399 aa)
LOC107090405Uncharacterized protein. (457 aa)
ncbp2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (164 aa)
snrpgSmall nuclear ribonucleoprotein G. (76 aa)
plrg1Pleiotropic regulator 1. (512 aa)
snrpb2Small nuclear ribonucleoprotein polypeptide B2. (220 aa)
LOC107091875Heterogeneous nuclear ribonucleoprotein A1a. (338 aa)
xab2XPA binding protein 2. (849 aa)
slirpSRA stem-loop interacting RNA binding protein. (101 aa)
eftud2Elongation factor Tu GTP binding domain containing 2. (1003 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
prpf38aPre-mRNA processing factor 38A. (309 aa)
snw1SNW domain containing 1. (498 aa)
ENSCVAP00000010012Uncharacterized protein. (132 aa)
prpf19Pre-mRNA processing factor 19. (505 aa)
LOC107102968Zgc:158803. (417 aa)
smu1SMU1 DNA replication regulator and spliceosomal factor b. (507 aa)
ENSCVAP00000009690Uncharacterized protein. (145 aa)
DHX15DEAH-box helicase 15. (762 aa)
LOC107091002Uncharacterized protein. (835 aa)
ddx42DEAD (Asp-Glu-Ala-Asp) box helicase 42. (901 aa)
rnf113aRing finger protein 113A. (321 aa)
ENSCVAP00000009384Coiled-coil domain containing 12. (134 aa)
CSDC2Cold shock domain containing C2. (155 aa)
rnps1RNA binding protein S1, serine-rich domain. (288 aa)
rbm22RNA binding motif protein 22. (427 aa)
LOC107101867RRM domain-containing protein. (451 aa)
HNRNPH3Heterogeneous nuclear ribonucleoprotein H3. (399 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
ppil3Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (161 aa)
dhx35DEAH-box helicase 35. (699 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2. (121 aa)
ppil1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)
PCBP2Poly(rC) binding protein 2. (456 aa)
LOC107093095BUD31 homolog. (144 aa)
LOC107101924RRM domain-containing protein. (168 aa)
LOC107102485Apoptotic chromatin condensation inducer 1b. (1176 aa)
SART1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (771 aa)
Rbmx2Uncharacterized protein. (58 aa)
LOC107087042RNA binding motif protein 10. (906 aa)
ENSCVAP00000007759Uncharacterized protein. (109 aa)
Hnrnpul1SAP domain-containing protein. (85 aa)
LOC107104445GC-rich sequence DNA-binding factor 2. (864 aa)
dhx33DEAH (Asp-Glu-Ala-His) box polypeptide 33. (681 aa)
rbmxRNA binding motif protein X-linked. (385 aa)
prpf31PRP31 pre-mRNA processing factor 31 homolog (yeast). (508 aa)
sf3b6Splicing factor 3b, subunit 6. (125 aa)
sf3b5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
LOC107103205RNA binding motif protein 25a. (615 aa)
sf3b4Splicing factor 3b, subunit 4. (389 aa)
rbm5RNA binding motif protein 5. (848 aa)
cactinCactin. (860 aa)
phf5aPHD finger protein 5A. (110 aa)
ENSCVAP00000023138Heterogeneous nuclear ribonucleoprotein K. (364 aa)
dhx32DEAH (Asp-Glu-Ala-His) box polypeptide 32a. (729 aa)
srsf7Serine and arginine rich splicing factor 7b. (264 aa)
eif4a3Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (406 aa)
cwf19l2CWF19 like cell cycle control factor 2. (921 aa)
ctnnbl1Catenin, beta like 1. (574 aa)
cdc40Cell division cycle 40 homolog (S. cerevisiae). (581 aa)
sap18Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins. (153 aa)
ENSCVAP00000024197Uncharacterized protein. (298 aa)
leng1Leukocyte receptor cluster (LRC) member 1. (274 aa)
cwc25CWC25 spliceosome associated protein homolog. (398 aa)
alyrefRRM domain-containing protein. (242 aa)
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
LOC107093917DEAQ box RNA-dependent ATPase 1. (795 aa)
sde2SDE2 telomere maintenance homolog (S. pombe). (406 aa)
LOC107100820Src homology 2 domain containing transforming protein D, a. (437 aa)
snrnp40Small nuclear ribonucleoprotein 40 (U5). (347 aa)
nktrNatural killer cell triggering receptor. (1377 aa)
dhx16DEAH (Asp-Glu-Ala-His) box polypeptide 16. (902 aa)
LOC107090027RRM domain-containing protein. (450 aa)
ZNF830Zinc finger protein 830. (336 aa)
dhx8DEAH (Asp-Glu-Ala-His) box polypeptide 8. (1230 aa)
Acin1SAP domain-containing protein. (1043 aa)
acin1Apoptotic chromatin condensation inducer 1a. (575 aa)
csdc2Cold shock domain containing C2, RNA binding a. (155 aa)
LOC107103767Calcium regulated heat stable protein 1. (162 aa)
LOC107089377Uncharacterized protein. (247 aa)
LOC107088364Polymerase (RNA) II (DNA directed) polypeptide K. (58 aa)
LOC107092722Poly(rC) binding protein 3. (327 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1966 aa)
magohMago homolog, exon junction complex subunit. (147 aa)
nkapNFKB activating protein. (402 aa)
upf3bUPF3B regulator of nonsense mediated mRNA decay. (455 aa)
ENSCVAP00000003741Uncharacterized protein. (191 aa)
ppp1r10Protein phosphatase 1, regulatory subunit 10. (799 aa)
SUGP1SURP and G-patch domain containing 1. (630 aa)
ENSCVAP00000003526Zgc:110045. (218 aa)
LOC107099697RPOLD domain-containing protein. (275 aa)
tra2bTransformer 2 beta homolog. (275 aa)
sf3a1Splicing factor 3a, subunit 1. (784 aa)
mtrexMtr4 exosome RNA helicase. (1036 aa)
prpf40aPRP40 pre-mRNA processing factor 40 homolog A. (855 aa)
wdr53WD repeat domain 53. (400 aa)
mfap1Microfibril associated protein 1. (408 aa)
LOC107095679Heterogeneous nuclear ribonucleoprotein Ub. (747 aa)
tra2aRRM domain-containing protein. (291 aa)
Snrnp70Small nuclear ribonucleoprotein 70 (U1). (160 aa)
SRSF3Serine and arginine rich splicing factor 3. (165 aa)
sf3b1Splicing factor 3b, subunit 1. (1268 aa)
prkrip1PRKR interacting protein 1. (191 aa)
LOC107100344Poly(rC) binding protein 4. (422 aa)
ENSCVAP00000002455RALY heterogeneous nuclear ribonucleoprotein. (114 aa)
rbm25RNA binding motif protein 25b. (802 aa)
aqrAquarius intron-binding spliceosomal factor. (1469 aa)
PNNPinin, desmosome associated protein. (666 aa)
u2surpU2 snRNP-associated SURP domain containing. (967 aa)
LOC107103912RRM domain-containing protein. (288 aa)
luc7l3LUC7-like 3 pre-mRNA splicing factor. (481 aa)
rnpc3RNA-binding region (RNP1, RRM) containing 3. (512 aa)
ENSCVAP00000001425RRM domain-containing protein. (123 aa)
dhx34DEAH (Asp-Glu-Ala-His) box polypeptide 34. (1148 aa)
Srek1Splicing regulatory glutamine/lysine-rich protein 1. (201 aa)
fam32aFamily with sequence similarity 32 member A. (96 aa)
snrnp27Small nuclear ribonucleoprotein 27 (U4/U6.U5). (161 aa)
gpatch1G patch domain containing 1. (780 aa)
bcas2BCAS2 pre-mRNA processing factor. (225 aa)
lin28bLin-28 homolog B (C. elegans). (234 aa)
ENSCVAP00000000909Serine and arginine rich splicing factor 6. (130 aa)
txnl4aThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
LOC107105121Uncharacterized protein. (472 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (144 aa)
snrpd3Small nuclear ribonucleoprotein Sm D3. (127 aa)
ppil4Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (468 aa)
zcrb1Zinc finger CCHC-type and RNA binding motif 1. (220 aa)
LOC107093463RNA binding motif protein 7. (259 aa)
sf1Splicing factor 1. (677 aa)
Srsf6Serine and arginine rich splicing factor 6. (261 aa)
ppihPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (161 aa)
ybx1Y box binding protein 1. (299 aa)
LOC107091193Uncharacterized protein. (312 aa)
rbm17RNA binding motif protein 17. (392 aa)
tprg1lTumor protein p63 regulated 1-like. (282 aa)
ENSCVAP00000020899RNA binding motif protein 41. (409 aa)
bud13BUD13 homolog. (517 aa)
ENSCVAP00000021298RALY heterogeneous nuclear ribonucleoprotein. (147 aa)
sf3b2Splicing factor 3b, subunit 2. (848 aa)
zmat2Zinc finger, matrin-type 2. (201 aa)
LOC107091769Cwf21 domain-containing protein. (1349 aa)
cherpCalcium homeostasis endoplasmic reticulum protein. (722 aa)
snrpaSmall nuclear ribonucleoprotein polypeptide A. (273 aa)
YBX2Y-box binding protein 2. (331 aa)
ENSCVAP00000021961RRM domain-containing protein. (292 aa)
cirbpCold inducible RNA binding protein b. (185 aa)
ENSCVAP00000024312Uncharacterized protein. (232 aa)
prpf4bPre-mRNA processing factor 4Bb. (1014 aa)
NCBP1Nuclear cap binding protein subunit 1. (813 aa)
ENSCVAP00000024722Ig-like domain-containing protein. (150 aa)
prpf3PRP3 pre-mRNA processing factor 3 homolog (yeast). (695 aa)
PUF60Poly-U binding splicing factor b. (513 aa)
HNRNPUL1Heterogeneous nuclear ribonucleoprotein U like 1. (717 aa)
cwc22CWC22 spliceosome associated protein homolog. (1010 aa)
nol8RRM domain-containing protein. (97 aa)
ENSCVAP00000025291Uncharacterized protein. (465 aa)
Prpf8MPN domain-containing protein. (322 aa)
sf3a3Splicing factor 3a, subunit 3. (494 aa)
sf3b3Splicing factor 3b, subunit 3. (1217 aa)
prpf6PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae). (969 aa)
LOC107093874Zgc:103692. (293 aa)
LOC107084290Zgc:103697. (225 aa)
tfip11Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family. (835 aa)
LOC107089850Zgc:163098. (867 aa)
prpf18PRP18 pre-mRNA processing factor 18 homolog (yeast). (350 aa)
LOC107104328Synaptotagmin binding, cytoplasmic RNA interacting protein. (632 aa)
UBL5Ubiquitin like 5. (73 aa)
gtf2f1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (504 aa)
txnl4bThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (149 aa)
htatsf1HIV-1 Tat specific factor 1. (450 aa)
snrpcU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (147 aa)
ptbp1Polypyrimidine tract binding protein 1a. (577 aa)
LOC107081054Small nuclear ribonucleoprotein Sm D2. (118 aa)
casc3Casc3 exon junction complex subunit. (736 aa)
gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (268 aa)
crnkl1Crooked neck pre-mRNA splicing factor 1. (743 aa)
lsm2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (106 aa)
WDR25WD repeat domain 25. (503 aa)
LOC107094832Poly(rC) binding protein 2. (318 aa)
lrmdaLeucine rich melanocyte differentiation associated. (233 aa)
bud31BUD31 homolog. (151 aa)
ENSCVAP00000029121WD_REPEATS_REGION domain-containing protein. (174 aa)
srsf5Serine and arginine rich splicing factor 5a. (296 aa)
gpkowG patch domain and KOW motifs. (501 aa)
LOC107103475Uncharacterized protein. (802 aa)
ppwd1Peptidylprolyl isomerase domain and WD repeat containing 1. (630 aa)
wbp11WW domain binding protein 11. (465 aa)
LOC107104618DEAD (Asp-Glu-Ala-Asp) box helicase 5; Belongs to the DEAD box helicase family. (495 aa)
ralylRRM domain-containing protein. (293 aa)
ppil2Peptidylprolyl isomerase (cyclophilin)-like 2. (525 aa)
ENSCVAP00000030023annotation not available (241 aa)
ENSCVAP00000030039Uncharacterized protein. (375 aa)
SMU1SMU1 DNA replication regulator and spliceosomal factor. (513 aa)
LOC107090357Serine and arginine rich splicing factor 1a. (245 aa)
snrpa1Small nuclear ribonucleoprotein polypeptide A. (250 aa)
ppiePeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (301 aa)
slu7SLU7 homolog, splicing factor. (565 aa)
syf2SYF2 pre-mRNA-splicing factor. (239 aa)
srrtSerrate RNA effector molecule homolog (Arabidopsis). (876 aa)
hnrnpdHeterogeneous nuclear ribonucleoprotein D. (317 aa)
hnrnplHeterogeneous nuclear ribonucleoprotein L. (541 aa)
LOC107093566DEAH (Asp-Glu-Ala-His) box polypeptide 32b. (739 aa)
snrpeSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
LOC107099780Uncharacterized protein. (204 aa)
LOC107084137Uncharacterized protein. (225 aa)
LOC107104527Uncharacterized protein. (550 aa)
ENSCVAP00000031729WD_REPEATS_REGION domain-containing protein. (328 aa)
sf3a2Splicing factor 3a, subunit 2. (294 aa)
LOC107091295Serine and arginine rich splicing factor 9. (244 aa)
srsf2Serine and arginine rich splicing factor 2a. (232 aa)
ENSCVAP00000032378Uncharacterized protein. (106 aa)
LOC107087836DNA-directed RNA polymerases I, II, and III subunit RPABC4. (58 aa)
LOC107088984Heterogeneous nuclear ribonucleoprotein K, like. (464 aa)
luc7lLUC7-like (S. cerevisiae). (360 aa)
ddx46DEAD (Asp-Glu-Ala-Asp) box polypeptide 46. (1073 aa)
usp39Ubiquitin specific peptidase 39. (498 aa)
Prpf4WD_REPEATS_REGION domain-containing protein. (123 aa)
ptbp3Uncharacterized protein. (554 aa)
wbp4Uncharacterized protein. (400 aa)
ENSCVAP00000018298Uncharacterized protein. (438 aa)
zmat5Zinc finger, matrin-type 5. (175 aa)
PPIGPeptidylprolyl isomerase G. (690 aa)
HNRNPLLHeterogeneous nuclear ribonucleoprotein L like. (476 aa)
nsrp1Nuclear speckle splicing regulatory protein 1. (457 aa)
polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (172 aa)
paxbp1PAX3 and PAX7 binding protein 1. (879 aa)
zrsr2Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2. (559 aa)
snrpd1Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (119 aa)
rbm8aRNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (173 aa)
lsm8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
LOC107097501RNA binding motif protein 6. (1291 aa)
smndc1Survival motor neuron domain containing 1. (238 aa)
LOC107092507Serine and arginine rich splicing factor 7a. (259 aa)
syncripSynaptotagmin binding, cytoplasmic RNA interacting protein, like. (542 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
snrnp48Small nuclear ribonucleoprotein 48 (U11/U12). (387 aa)
LOC107101884Heterogeneous nuclear ribonucleoprotein A/Ba. (321 aa)
Srrm1PWI domain-containing protein. (237 aa)
znf318Uncharacterized protein. (2145 aa)
srsf10Serine and arginine rich splicing factor 10. (227 aa)
ikUncharacterized protein. (529 aa)
hnrnpa3Heterogeneous nuclear ribonucleoprotein A3. (345 aa)
LOC107091385Uncharacterized protein. (489 aa)
fam50aFamily with sequence similarity 50 member A. (342 aa)
daw1WD_REPEATS_REGION domain-containing protein. (413 aa)
hnrnprHeterogeneous nuclear ribonucleoprotein R. (631 aa)
dnajc8DnaJ (Hsp40) homolog, subfamily C, member 8. (250 aa)
POLR2CPolymerase (RNA) II (DNA directed) polypeptide C. (248 aa)
LOC107091937Leucine rich repeat containing 51. (180 aa)
snip1Smad nuclear interacting protein. (363 aa)
cwc27CWC27 spliceosome associated cyclophilin. (479 aa)
LOC107088613Polypyrimidine tract binding protein 2b. (523 aa)
snrnp200Small nuclear ribonucleoprotein 200 (U5). (2056 aa)
LOC107093669Serine and arginine rich splicing factor 5b. (325 aa)
ppp1r8Protein phosphatase 1, regulatory subunit 8b. (349 aa)
pqbp1Polyglutamine binding protein 1. (236 aa)
LOC107102835RRM domain-containing protein. (324 aa)
parpbpPARP1 binding protein. (588 aa)
LOC107083529General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (253 aa)
snrnp25Small nuclear ribonucleoprotein 25. (184 aa)
ddx23DEAD (Asp-Glu-Ala-Asp) box polypeptide 23. (802 aa)
SnrpfSmall nuclear ribonucleoprotein polypeptide F. (126 aa)
LOC107088665Tumor protein p63 regulated 1. (259 aa)
LOC107100576Uncharacterized protein; Belongs to the DEAD box helicase family. (572 aa)
LOC107087450Aly/REF export factor. (268 aa)
cdc5lCDC5 cell division cycle 5-like (S. pombe). (670 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
LOC107086442Uncharacterized protein. (351 aa)
DDX41DEAD-box helicase 41. (562 aa)
cwc15CWC15 spliceosome associated protein homolog. (238 aa)
LOC107103552ISY1 splicing factor homolog. (280 aa)
polr2jPolymerase (RNA) II (DNA directed) polypeptide J. (117 aa)
SNRPNSmall nuclear ribonucleoprotein-associated protein. (241 aa)
hnrnph1Heterogeneous nuclear ribonucleoprotein H1. (406 aa)
ccar1Cell division cycle and apoptosis regulator 1. (1227 aa)
TCERG1Transcription elongation regulator 1. (1023 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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