STRINGSTRING
eif3b eif3b rps21 rps21 eif2s3 eif2s3 LOC107081821 LOC107081821 LOC107090837 LOC107090837 eif3j eif3j LOC107084035 LOC107084035 eif3i eif3i LOC107100654 LOC107100654 rps12 rps12 RPS19 RPS19 rps3a rps3a rps14 rps14 LOC107096430 LOC107096430 eif3m eif3m rps10 rps10 rps13 rps13 LOC107097556 LOC107097556 eif3g eif3g LOC107090959 LOC107090959 LOC107088384 LOC107088384 rps15a rps15a EIF4EBP3 EIF4EBP3 eif3f eif3f rps18 rps18 LOC107081314 LOC107081314 rps9 rps9 rpsa rpsa LOC107088373 LOC107088373 eif3a eif3a RPS29 RPS29 rps23 rps23 arl6ip1 arl6ip1 LOC107103884 LOC107103884 rps11 rps11 rps4x rps4x rps28 rps28 rps6 rps6 ENSCVAP00000032796 ENSCVAP00000032796 LOC107103981 LOC107103981 eif4ebp2 eif4ebp2 rps16 rps16 LOC107084670 LOC107084670 LOC107085786 LOC107085786 rps8 rps8 rps15 rps15 rps7 rps7 LOC107098142 LOC107098142 LOC107101562 LOC107101562 eif3k eif3k eif3h eif3h ENSCVAP00000031592 ENSCVAP00000031592 LOC107097317 LOC107097317 LOC107095806 LOC107095806 eif3d eif3d eif2s2 eif2s2 rps26 rps26 eif3l eif3l rps2 rps2 eif2s1 eif2s1 eif3e eif3e rps17 rps17 LOC107103682 LOC107103682 eif4b eif4b rps25 rps25 rps3 rps3 LOC107097224 LOC107097224 LOC107086545 LOC107086545 rps24 rps24
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
eif3bEukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (680 aa)
rps2140S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)
eif2s3Eukaryotic translation initiation factor 2, subunit 3 gamma. (487 aa)
LOC107081821Eukaryotic translation initiation factor 1A X-linked b. (146 aa)
LOC107090837Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (436 aa)
eif3jEukaryotic translation initiation factor 3, subunit Jb. (200 aa)
LOC10708403540S ribosomal protein S27. (84 aa)
eif3iEukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (325 aa)
LOC107100654Eukaryotic translation initiation factor 4E family member 1c; Belongs to the eukaryotic initiation factor 4E family. (210 aa)
rps1240S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (187 aa)
RPS19Ribosomal protein S19. (152 aa)
rps3a40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (266 aa)
rps14Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
LOC107096430Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (616 aa)
eif3mEukaryotic translation initiation factor 3 subunit M; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (375 aa)
rps10Ribosomal protein S10. (166 aa)
rps13Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
LOC107097556Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (639 aa)
eif3gEukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (296 aa)
LOC107090959Eukaryotic translation initiation factor 4E binding protein 1. (121 aa)
LOC10708838440S ribosomal protein S27. (142 aa)
rps15aRibosomal protein S15a; Belongs to the universal ribosomal protein uS8 family. (130 aa)
EIF4EBP3Eukaryotic translation initiation factor 4E binding protein 3, like. (114 aa)
eif3fEukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (273 aa)
rps18Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (152 aa)
LOC107081314Ribosomal protein S5. (122 aa)
rps9Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
rpsa40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (309 aa)
LOC107088373Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (635 aa)
eif3aEukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (1201 aa)
RPS29Ribosomal protein S29. (60 aa)
rps23Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
arl6ip1ADP-ribosylation factor-like 6 interacting protein 1. (203 aa)
LOC107103884Eukaryotic translation initiation factor 4A, isoform 2; Belongs to the DEAD box helicase family. (411 aa)
rps11Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (161 aa)
rps4x40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
rps28Ribosomal protein S28. (69 aa)
rps640S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
ENSCVAP00000032796Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (175 aa)
LOC107103981Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (635 aa)
eif4ebp2Eukaryotic translation initiation factor 4E binding protein 2. (114 aa)
rps16Ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (146 aa)
LOC107084670Ribosomal protein S19. (146 aa)
LOC107085786Eukaryotic translation initiation factor 4eb; Belongs to the eukaryotic initiation factor 4E family. (224 aa)
rps840S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (238 aa)
rps15Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (145 aa)
rps740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (176 aa)
LOC107098142Eukaryotic translation initiation factor 4A1B; Belongs to the DEAD box helicase family. (404 aa)
LOC107101562Ribosomal protein S20. (119 aa)
eif3kEukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (220 aa)
eif3hEukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (341 aa)
ENSCVAP00000031592annotation not available (64 aa)
LOC10709731740S ribosomal protein S27. (84 aa)
LOC107095806Eukaryotic translation initiation factor 4ea; Belongs to the eukaryotic initiation factor 4E family. (217 aa)
eif3dEukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs. (507 aa)
eif2s2Eukaryotic translation initiation factor 2, subunit 2 beta. (331 aa)
rps2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (129 aa)
eif3lEukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (570 aa)
rps2Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (490 aa)
eif2s1Eukaryotic translation initiation factor 2, subunit 1 alpha b. (315 aa)
eif3eEukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (442 aa)
rps17Uncharacterized protein. (166 aa)
LOC107103682Uncharacterized protein. (119 aa)
eif4bEukaryotic translation initiation factor 4Bb. (644 aa)
rps2540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (123 aa)
rps3Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (245 aa)
LOC107097224Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (927 aa)
LOC107086545Ribosomal protein S17. (134 aa)
rps2440S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (132 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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