13 items (Cyprinodon variegatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107082845	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta; Belongs to the thiolase-like superfamily. Thiolase family. (339 aa)
	LOC107098543	Zgc:101569; Belongs to the enoyl-CoA hydratase/isomerase family. (308 aa)
	LOC107094438	Zgc:154061. (294 aa)
	echs1	Enoyl CoA hydratase, short chain, 1, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family. (291 aa)
	acadvl	Acyl-CoA dehydrogenase very long chain. (658 aa)
	mecr	Mitochondrial trans-2-enoyl-CoA reductase. (408 aa)
	ECHDC1	Ethylmalonyl-CoA decarboxylase 1; Belongs to the enoyl-CoA hydratase/isomerase family. (307 aa)
	hadh	Hydroxyacyl-CoA dehydrogenase. (309 aa)
	hadhb	Uncharacterized protein. (78 aa)
	acadl	Acyl-CoA dehydrogenase long chain. (413 aa)
	ACADM	Acyl-CoA dehydrogenase medium chain. (262 aa)
	ENSCVAP00000029853	Acyl-CoA_dh_N domain-containing protein. (137 aa)
	hadha	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b; Belongs to the enoyl-CoA hydratase/isomerase family. (643 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACADM	ECHDC1	ENSCVAP00000029821	ENSCVAP00000017619	Acyl-CoA dehydrogenase medium chain.	Ethylmalonyl-CoA decarboxylase 1; Belongs to the enoyl-CoA hydratase/isomerase family.	0.621
ACADM	LOC107082845	ENSCVAP00000029821	ENSCVAP00000031678	Acyl-CoA dehydrogenase medium chain.	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta; Belongs to the thiolase-like superfamily. Thiolase family.	0.687
ACADM	LOC107098543	ENSCVAP00000029821	ENSCVAP00000001294	Acyl-CoA dehydrogenase medium chain.	Zgc:101569; Belongs to the enoyl-CoA hydratase/isomerase family.	0.621
ACADM	acadl	ENSCVAP00000029821	ENSCVAP00000026499	Acyl-CoA dehydrogenase medium chain.	Acyl-CoA dehydrogenase long chain.	0.647
ACADM	acadvl	ENSCVAP00000029821	ENSCVAP00000004282	Acyl-CoA dehydrogenase medium chain.	Acyl-CoA dehydrogenase very long chain.	0.409
ACADM	echs1	ENSCVAP00000029821	ENSCVAP00000002795	Acyl-CoA dehydrogenase medium chain.	Enoyl CoA hydratase, short chain, 1, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family.	0.707
ACADM	hadh	ENSCVAP00000029821	ENSCVAP00000020711	Acyl-CoA dehydrogenase medium chain.	Hydroxyacyl-CoA dehydrogenase.	0.839
ACADM	hadha	ENSCVAP00000029821	ENSCVAP00000032432	Acyl-CoA dehydrogenase medium chain.	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b; Belongs to the enoyl-CoA hydratase/isomerase family.	0.740
ACADM	hadhb	ENSCVAP00000029821	ENSCVAP00000021394	Acyl-CoA dehydrogenase medium chain.	Uncharacterized protein.	0.687
ECHDC1	ACADM	ENSCVAP00000017619	ENSCVAP00000029821	Ethylmalonyl-CoA decarboxylase 1; Belongs to the enoyl-CoA hydratase/isomerase family.	Acyl-CoA dehydrogenase medium chain.	0.621
ECHDC1	ENSCVAP00000029853	ENSCVAP00000017619	ENSCVAP00000029853	Ethylmalonyl-CoA decarboxylase 1; Belongs to the enoyl-CoA hydratase/isomerase family.	Acyl-CoA_dh_N domain-containing protein.	0.621
ECHDC1	LOC107082845	ENSCVAP00000017619	ENSCVAP00000031678	Ethylmalonyl-CoA decarboxylase 1; Belongs to the enoyl-CoA hydratase/isomerase family.	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta; Belongs to the thiolase-like superfamily. Thiolase family.	0.764
ECHDC1	acadl	ENSCVAP00000017619	ENSCVAP00000026499	Ethylmalonyl-CoA decarboxylase 1; Belongs to the enoyl-CoA hydratase/isomerase family.	Acyl-CoA dehydrogenase long chain.	0.643
ECHDC1	acadvl	ENSCVAP00000017619	ENSCVAP00000004282	Ethylmalonyl-CoA decarboxylase 1; Belongs to the enoyl-CoA hydratase/isomerase family.	Acyl-CoA dehydrogenase very long chain.	0.614
ECHDC1	hadh	ENSCVAP00000017619	ENSCVAP00000020711	Ethylmalonyl-CoA decarboxylase 1; Belongs to the enoyl-CoA hydratase/isomerase family.	Hydroxyacyl-CoA dehydrogenase.	0.953
ECHDC1	hadha	ENSCVAP00000017619	ENSCVAP00000032432	Ethylmalonyl-CoA decarboxylase 1; Belongs to the enoyl-CoA hydratase/isomerase family.	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b; Belongs to the enoyl-CoA hydratase/isomerase family.	0.711
ECHDC1	hadhb	ENSCVAP00000017619	ENSCVAP00000021394	Ethylmalonyl-CoA decarboxylase 1; Belongs to the enoyl-CoA hydratase/isomerase family.	Uncharacterized protein.	0.764
ENSCVAP00000029853	ECHDC1	ENSCVAP00000029853	ENSCVAP00000017619	Acyl-CoA_dh_N domain-containing protein.	Ethylmalonyl-CoA decarboxylase 1; Belongs to the enoyl-CoA hydratase/isomerase family.	0.621
ENSCVAP00000029853	LOC107082845	ENSCVAP00000029853	ENSCVAP00000031678	Acyl-CoA_dh_N domain-containing protein.	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta; Belongs to the thiolase-like superfamily. Thiolase family.	0.687
ENSCVAP00000029853	LOC107098543	ENSCVAP00000029853	ENSCVAP00000001294	Acyl-CoA_dh_N domain-containing protein.	Zgc:101569; Belongs to the enoyl-CoA hydratase/isomerase family.	0.621