13 items (Cyprinodon variegatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	hras	HRas proto-oncogene, GTPase a. (189 aa)
	grb2	Growth factor receptor-bound protein 2b. (217 aa)
	LOC107084246	cAMP responsive element binding protein 1. (313 aa)
	LOC107101186	Mitogen-activated protein kinase. (379 aa)
	CSDE1	Cold shock domain containing E1, RNA-binding. (907 aa)
	LOC107095138	Zgc:55558. (187 aa)
	creb1	cAMP responsive element binding protein 1a. (331 aa)
	mapk7	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (1095 aa)
	LOC107088346	Uncharacterized protein. (315 aa)
	LOC107088073	Ribosomal protein S6 kinase. (779 aa)
	LOC107084094	Ribosomal protein S6 kinase. (746 aa)
	mapk1	Mitogen-activated protein kinase. (351 aa)
	KRAS	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog. (189 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSDE1	LOC107101186	ENSCVAP00000000427	ENSCVAP00000013006	Cold shock domain containing E1, RNA-binding.	Mitogen-activated protein kinase.	0.445
CSDE1	grb2	ENSCVAP00000000427	ENSCVAP00000009535	Cold shock domain containing E1, RNA-binding.	Growth factor receptor-bound protein 2b.	0.684
CSDE1	mapk1	ENSCVAP00000000427	ENSCVAP00000015363	Cold shock domain containing E1, RNA-binding.	Mitogen-activated protein kinase.	0.445
CSDE1	mapk7	ENSCVAP00000000427	ENSCVAP00000022745	Cold shock domain containing E1, RNA-binding.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.445
KRAS	LOC107095138	ENSCVAP00000004733	ENSCVAP00000004689	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.	Zgc:55558.	0.901
KRAS	LOC107101186	ENSCVAP00000004733	ENSCVAP00000013006	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.	Mitogen-activated protein kinase.	0.445
KRAS	grb2	ENSCVAP00000004733	ENSCVAP00000009535	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.	Growth factor receptor-bound protein 2b.	0.684
KRAS	hras	ENSCVAP00000004733	ENSCVAP00000007057	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.	HRas proto-oncogene, GTPase a.	0.910
KRAS	mapk1	ENSCVAP00000004733	ENSCVAP00000015363	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.	Mitogen-activated protein kinase.	0.445
KRAS	mapk7	ENSCVAP00000004733	ENSCVAP00000022745	V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.445
LOC107084094	LOC107084246	ENSCVAP00000030622	ENSCVAP00000010250	Ribosomal protein S6 kinase.	cAMP responsive element binding protein 1.	0.479
LOC107084094	LOC107088073	ENSCVAP00000030622	ENSCVAP00000028346	Ribosomal protein S6 kinase.	Ribosomal protein S6 kinase.	0.429
LOC107084094	LOC107088346	ENSCVAP00000030622	ENSCVAP00000023323	Ribosomal protein S6 kinase.	Uncharacterized protein.	0.479
LOC107084094	LOC107101186	ENSCVAP00000030622	ENSCVAP00000013006	Ribosomal protein S6 kinase.	Mitogen-activated protein kinase.	0.959
LOC107084094	creb1	ENSCVAP00000030622	ENSCVAP00000015382	Ribosomal protein S6 kinase.	cAMP responsive element binding protein 1a.	0.479
LOC107084094	mapk1	ENSCVAP00000030622	ENSCVAP00000015363	Ribosomal protein S6 kinase.	Mitogen-activated protein kinase.	0.959
LOC107084094	mapk7	ENSCVAP00000030622	ENSCVAP00000022745	Ribosomal protein S6 kinase.	Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.	0.612
LOC107084246	LOC107084094	ENSCVAP00000010250	ENSCVAP00000030622	cAMP responsive element binding protein 1.	Ribosomal protein S6 kinase.	0.479
LOC107084246	LOC107088073	ENSCVAP00000010250	ENSCVAP00000028346	cAMP responsive element binding protein 1.	Ribosomal protein S6 kinase.	0.479
LOC107084246	LOC107088346	ENSCVAP00000010250	ENSCVAP00000023323	cAMP responsive element binding protein 1.	Uncharacterized protein.	0.901