STRINGSTRING
ank1 ank1 LOC107092921 LOC107092921 LOC107087409 LOC107087409 ENSCVAP00000016828 ENSCVAP00000016828 tjp1 tjp1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ank1Ankyrin 1, erythrocytic b. (1322 aa)
LOC107092921Uncharacterized protein. (1946 aa)
LOC107087409Tight junction protein 1b; Belongs to the MAGUK family. (1574 aa)
ENSCVAP00000016828Uncharacterized protein. (914 aa)
tjp1Tight junction protein 1a; Belongs to the MAGUK family. (1760 aa)
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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