65 items (Cyprinodon variegatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC107093391	Collagen beta(1-O)galactosyltransferase 1. (610 aa)
	LOC107091208	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (492 aa)
	ehmt2	Euchromatic histone-lysine N-methyltransferase 2. (1130 aa)
	aass	Aminoadipate-semialdehyde synthase. (877 aa)
	echs1	Enoyl CoA hydratase, short chain, 1, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family. (291 aa)
	ehhadh	Enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. (733 aa)
	nsd1	Nuclear receptor binding SET domain protein 1b. (2513 aa)
	nsd2	Nuclear receptor binding SET domain protein 2. (1456 aa)
	LOC107088877	Uncharacterized protein. (1276 aa)
	LOC107101488	Uncharacterized protein. (344 aa)
	LOC107086058	Lysine methyltransferase 5Aa. (411 aa)
	ezh2	Enhancer of zeste 2 polycomb repressive complex 2 subunit. (761 aa)
	smyd1	Uncharacterized protein. (476 aa)
	aldh7a1	Aldehyde dehydrogenase 7 family, member A1; Belongs to the aldehyde dehydrogenase family. (542 aa)
	pipox	Pipecolic acid oxidase. (388 aa)
	dhtkd1	Dehydrogenase E1 and transketolase domain containing 1. (923 aa)
	LOC107092173	SET and MYND domain containing 2a. (435 aa)
	suv39h1	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. (405 aa)
	setd1a	SET domain containing 1A, histone lysine methyltransferase. (2177 aa)
	cercam	Cerebral endothelial cell adhesion molecule. (591 aa)
	aldh9a1	Aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1; Belongs to the aldehyde dehydrogenase family. (505 aa)
	Camkmt	Si:ch73-54n14.2. (132 aa)
	LOC107083604	Aldehyde dehydrogenase 9 family, member A1b; Belongs to the aldehyde dehydrogenase family. (513 aa)
	aadat	Aminoadipate aminotransferase. (425 aa)
	aldh16a1	Aldehyde dehydrogenase 16 family, member A1. (788 aa)
	plod3	Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3. (636 aa)
	aldh2	Aldehyde dehydrogenase 2 family member, tandem duplicate 2; Belongs to the aldehyde dehydrogenase family. (517 aa)
	LOC107096940	SET domain-containing protein. (1939 aa)
	dot1l	Histone-lysine N-methyltransferase, H3 lysine-79 specific. (1365 aa)
	nsd3	Nuclear receptor binding SET domain protein 3. (1600 aa)
	LOC107084057	Ash1 (absent, small, or homeotic)-like (Drosophila). (2925 aa)
	LOC107101862	Nuclear receptor binding SET domain protein 1a. (2130 aa)
	PRDM6	PR/SET domain 6. (592 aa)
	acat1	Acetyl-CoA acetyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family. (420 aa)
	LOC107101873	5-phosphohydroxy-L-lysine phospho-lyase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (449 aa)
	LOC107086273	SET and MYND domain containing 1b. (489 aa)
	Kmt2d	Uncharacterized protein. (406 aa)
	smyd2	Uncharacterized protein. (432 aa)
	LOC107092408	Dihydrolipoamide S-succinyltransferase. (461 aa)
	Colgalt1	Uncharacterized protein. (238 aa)
	EZH1	Enhancer of zeste 1 polycomb repressive complex 2 subunit. (768 aa)
	Kmt2c	Uncharacterized protein. (464 aa)
	LOC107087301	Lysine methyltransferase 5Ab. (345 aa)
	acat2	Acetyl-CoA acetyltransferase 2; Belongs to the thiolase-like superfamily. Thiolase family. (438 aa)
	hadh	Hydroxyacyl-CoA dehydrogenase. (309 aa)
	LOC107091209	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (507 aa)
	LOC107099179	Uncharacterized protein. (587 aa)
	kmt2b	Lysine (K)-specific methyltransferase 2Bb. (3841 aa)
	KMT2A	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (4453 aa)
	GCDH	Glutaryl-CoA dehydrogenase b. (440 aa)
	setdb1	SET domain bifurcated histone lysine methyltransferase 1b. (1250 aa)
	tmlhe	Trimethyllysine hydroxylase, epsilon. (405 aa)
	ehmt1	Euchromatic histone-lysine N-methyltransferase 1b. (1279 aa)
	SMYD3	SET and MYND domain containing 3. (453 aa)
	dld	Dihydrolipoyl dehydrogenase. (508 aa)
	setd2	SET domain containing 2, histone lysine methyltransferase. (2591 aa)
	LOC107084159	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (515 aa)
	plod2	Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2. (722 aa)
	LOC107089716	Collagen beta(1-O)galactosyltransferase 2. (610 aa)
	LOC107082340	SET domain and mariner transposase fusion gene. (283 aa)
	bbox1	Butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1. (449 aa)
	plod1	Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a. (732 aa)
	hadha	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b; Belongs to the enoyl-CoA hydratase/isomerase family. (643 aa)
	kmt5b	Lysine methyltransferase 5B. (855 aa)
	setd7	SET domain containing 7, histone lysine methyltransferase. (382 aa)

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Camkmt	EZH1	ENSCVAP00000010691	ENSCVAP00000019320	Si:ch73-54n14.2.	Enhancer of zeste 1 polycomb repressive complex 2 subunit.	0.685
Camkmt	KMT2A	ENSCVAP00000010691	ENSCVAP00000023952	Si:ch73-54n14.2.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily.	0.667
Camkmt	Kmt2c	ENSCVAP00000010691	ENSCVAP00000019625	Si:ch73-54n14.2.	Uncharacterized protein.	0.663
Camkmt	Kmt2d	ENSCVAP00000010691	ENSCVAP00000018614	Si:ch73-54n14.2.	Uncharacterized protein.	0.663
Camkmt	LOC107082340	ENSCVAP00000010691	ENSCVAP00000030873	Si:ch73-54n14.2.	SET domain and mariner transposase fusion gene.	0.666
Camkmt	LOC107084057	ENSCVAP00000010691	ENSCVAP00000015123	Si:ch73-54n14.2.	Ash1 (absent, small, or homeotic)-like (Drosophila).	0.706
Camkmt	LOC107086058	ENSCVAP00000010691	ENSCVAP00000005531	Si:ch73-54n14.2.	Lysine methyltransferase 5Aa.	0.705
Camkmt	LOC107086273	ENSCVAP00000010691	ENSCVAP00000017557	Si:ch73-54n14.2.	SET and MYND domain containing 1b.	0.685
Camkmt	LOC107087301	ENSCVAP00000010691	ENSCVAP00000019642	Si:ch73-54n14.2.	Lysine methyltransferase 5Ab.	0.705
Camkmt	LOC107088877	ENSCVAP00000010691	ENSCVAP00000004882	Si:ch73-54n14.2.	Uncharacterized protein.	0.695
Camkmt	LOC107092173	ENSCVAP00000010691	ENSCVAP00000008981	Si:ch73-54n14.2.	SET and MYND domain containing 2a.	0.697
Camkmt	LOC107096940	ENSCVAP00000010691	ENSCVAP00000013661	Si:ch73-54n14.2.	SET domain-containing protein.	0.670
Camkmt	LOC107099179	ENSCVAP00000010691	ENSCVAP00000021816	Si:ch73-54n14.2.	Uncharacterized protein.	0.694
Camkmt	LOC107101862	ENSCVAP00000010691	ENSCVAP00000015246	Si:ch73-54n14.2.	Nuclear receptor binding SET domain protein 1a.	0.677
Camkmt	PRDM6	ENSCVAP00000010691	ENSCVAP00000015661	Si:ch73-54n14.2.	PR/SET domain 6.	0.652
Camkmt	SMYD3	ENSCVAP00000010691	ENSCVAP00000025475	Si:ch73-54n14.2.	SET and MYND domain containing 3.	0.697
Camkmt	dot1l	ENSCVAP00000010691	ENSCVAP00000014475	Si:ch73-54n14.2.	Histone-lysine N-methyltransferase, H3 lysine-79 specific.	0.739
Camkmt	ehmt1	ENSCVAP00000010691	ENSCVAP00000025350	Si:ch73-54n14.2.	Euchromatic histone-lysine N-methyltransferase 1b.	0.690
Camkmt	ehmt2	ENSCVAP00000010691	ENSCVAP00000002089	Si:ch73-54n14.2.	Euchromatic histone-lysine N-methyltransferase 2.	0.690
Camkmt	ezh2	ENSCVAP00000010691	ENSCVAP00000005808	Si:ch73-54n14.2.	Enhancer of zeste 2 polycomb repressive complex 2 subunit.	0.685